Knockdown of lncRNA SNHG14 alleviates LPS-induced inflammation and apoptosis of PC12 cells by regulating miR-181b-5p
- Authors:
- Published online on: March 17, 2021 https://doi.org/10.3892/etm.2021.9928
- Article Number: 497
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Copyright: © Jiang et al. This is an open access article distributed under the terms of Creative Commons Attribution License.
Abstract
Introduction
The spinal cord, which functions as a transporter to relay messages from the brain to the body and vice versa, transmits messages from the autonomic nervous system, which regulates numerous physiological functions, including heartbeat, blood pressure and temperature regulation. However, damage to the spinal cord can perturb all these functions. Spinal cord injury (SCI) is a severe central nervous system disorder that has been increasingly observed in the clinic over the past few years in China (1). Due to lack of successful treatment for SCI, 50-80% of patients with SCI suffer with long-term moderate to severe traumatic pain, which significantly impacts the families of the patients both financially and in providing care (2).
Since significant damage is produced by secondary injury alone, the inhibition of processes involved in secondary injury may be one of the most effective approaches to prevent the deterioration of SCI and promote functional recovery (3,4). The secretion of stimulating cytokines, which can facilitate neuronal damage and cell apoptosis, triggers the stimulus response and secondary injury. Previous studies have demonstrated that the levels of inflammatory factors, including IL-1β, TNF-α and IL-6, were elevated at the early SCI stage (5-7). Interestingly, inhibiting the secretion of these inflammatory factors was reported to serve a central role in protecting nerve cells (6). Thus, investigating the molecular mechanism by which inflammatory cytokines could be inhibited may be a novel and effective strategy for the treatment of SCI.
Long non-coding RNAs (lncRNAs) are non-coding RNAs of >200 nucleotides in length that lack protein-coding ability (8). LncRNAs were reported to be associated with the initiation and progression of numerous types of diseases, including Parkinson's disease, leukemia and periodontitis (9-13). Knockdown of small nucleolar RNA host gene 14 (SNHG14) protected nerve cells from damage by alleviating inflammation (14). In addition, lncRNA SNHG14 was revealed to promote neuronal impairment and inflammatory response induced by cerebral ischemia/reperfusion injury by regulating the microRNA (miRNA/miR)-136-5p/Rho-associated protein kinase 1 (ROCK1) signaling pathway, while SNHG14 knockdown could improve neurological function in vivo (15). SNHG14 knockdown was also discovered to alleviate lipopolysaccharide (LPS)-induced acute lung injury through the miR-34c-3p-dependent inhibition of Wnt inducible signaling pathway protein 1(16).
miRNAs are a class of non-coding RNAs that serve as important gene expression regulators (17). miRNAs negatively regulate target gene expression at the post-transcriptional level, which in turn regulates numerous cellular processes, such as cell differentiation, aging and apoptosis (17,18). Previous studies have reported that miR-181a/b-5p, which was found to modulate vascular inflammation and endotoxin tolerance, alleviated inflammation in monocrotaline-induced pulmonary arterial hypertension by targeting endocan (19,20).
To the best of our knowledge, no previous studies have reported the role of SNHG14 in SCI. Therefore, the present study aimed to investigate whether SNHG14 could participate in the neuronal protection and alleviate inflammation by regulating miR-181a/b-5p in SCI, in addition to determining the underlying mechanism.
Materials and methods
Cell culture and treatment
The PC-12 cell line was purchased from The Cell Bank of Type Culture Collection of the Chinese Academy of Sciences. The cells were cultured at a density of 1x104 cells/ml in DMEM-high glucose (Sigma-Aldrich; Merck KGaA) supplemented with 10% FBS (Gibco; Thermo Fisher Scientific, Inc.) and 100 U/ml penicillin/streptomycin (Gibco; Thermo Fisher Scientific, Inc.). The cells were maintained in a humidified incubator with 5% CO2 at 37˚C and the medium was replaced every 2-3 days.
To stimulate inflammatory cell injury following SCI, PC-12 cells were treated with 1, 2, 5 or 10 µg/ml LPS (Sigma-Aldrich; Merck KGA) for 12 h. In addition, the 12-h LPS treatment of PC-12 cells was conducted after transfection.
Cell transfection
Short hairpin RNA (shRNA) targeting SNHG14, vector, miR-181b-5p mimic, miR-181b-5p inhibitor and their corresponding negative controls (NCs) were purchased from Shanghai GenePharma Co., Ltd. miR-181b-5p mimic, 5'-AACAUUCAUUGCUGUCGGUGGGCA CCGACAGCAAUGAAUGUUUU-3'; mimic NC, 5'-UUCUCCGAACGUGUCACGUTTACGUGACACGUUCGGAGAATT-3'; miR-181b-5p inhibitor, 5'-CCCACCGACAGCAAUGAAUGUU-3' and Inhibitor NC: 5'-UCACAACCUCCUAGAAAGAGUAGA-3'. A total of 80 nM shRNA-SNHG14/shRNA-NC, 50 nM miR-181b-5p mimic/mimic-NC and 50 nM miR-181b-5p inhibitor/inhibitor-NC were transfected into PC12 cells at 80% confluence using Lipofectamine® 2000 reagent (Invitrogen; Thermo Fisher Scientific, Inc.). Following 48 h of transfection, the cells were collected for subsequent experiments.
Cell Counting Kit-8 (CCK-8) assay
The cells were seeded into 96-well plates at a density of 1x104 cells/well and stimulated with LPS at 37˚C for 12 h. Following stimulation, 10 µl CCK-8 reagent (Dojindo Molecular Technologies, Inc.) was added into the medium and incubated at 37˚C for a further 2 h. Finally, the absorbance of the cells was determined using a spectrophotometer at the wavelength of 450 nm.
TUNEL assay
A TUNEL detection kit (OriGene Technologies, Inc.) was used to analyze the apoptosis of PC12 cells following LPS induction. A six-well plate was added with a small amount of culture medium (500 µl) in order for the slides to be in close contact with the plate. Coverslips were then carefully placed in the plate. Following indicated treatments, PC-12 cell suspension was added to the coverslip at a density of 1x105 cells/well, which was incubated at 37˚C in a 5% CO2 chamber. The coverslips were washed in 37˚C PBS three times for 3-5 sec each time, fixed in 4% paraformaldehyde for 15 min at room temperature and then cleaned with 37˚C deionized water. The coverslips were dried on filter paper and glued to the slides with neutral balsam mounting medium. The sample slide was digested with protease K and then treated with terminal deoxynucleotidyl transferase and biotin-dUTP at 37˚C for 60 min. The slides were then sealed with sealing liquid and incubated with streptavidin-horseradish peroxidase (HRP) working liquid (cat. no. AR100017; OriGene Technologies, Inc.) and 3,3-diaminobenzidine color reagent (OriGene Technologies, Inc.). Cell nucleus were stained with hematoxylin at room temperature for 5 min and washed by PBS for three times. Finally, the color was observed and apoptotic cells were counted using a light microscope (magnification, x200) from five fields of view.
Reverse transcription-quantitative PCR (RT-qPCR)
Total RNA from PC-12 cells was extracted and purified using TRIzol® reagent (Invitrogen; Thermo Fisher Scientific, Inc.). Total RNA was reverse transcribed into cDNA using a PrimeScript™ II 1st Strand cDNA Synthesis kit (Takara Bio, Inc.) using the following protocol: 65˚C for 10 min, 25˚C for 10 min, 37˚C for 60 min and 70˚C for 10 min. qPCR was subsequently performed on an ABI Prism 7500 Sequence Detection system (Applied Biosystems; Thermo Fisher Scientific, Inc.) with a SYBR Green Real-Time PCR kit (Takara Bio, Inc.). The PCR reaction mixture (20 µl) consisted of 10 µl Real Time PCR Master mix, 2 µl primer mix (0.2 µM) and 20 ng cDNA diluted in RNase-free water. The primer sequences were as follows: SNHG14 forward, 5'-CGTTGTCGAAAGCTAAAAGGA-3' and reverse, 5'-TGTTTCCATCTCACCAAATGC-3'; GAPDH forward, 5'-GCACCGTCAAGGCTGAGAAC-3' and reverse, 5'-TGGTGAAGACGCCAGTGGA-3'; miR-181b-5p forward, 5'-ACACTCCAGCTGGGACTTGGGCACTGA AACA-3' and reverse, 5'-TGGTGTCGTGGAGTCG-3' and U6 forward, 5'-CTCGCTTCGGCAGCACA-3' and reverse, 5'-AACGCTTCACGAATTTGCGT-3'. The thermocycling conditions were as follows: Initial denaturation at 95˚C for 5 min, then 95˚C for 30 sec, 60˚C for 30 sec and 72˚C for 30 sec, for a total of 40 cycles. GAPDH and U6 served as the internal controls. Expression levels were quantified using the 2-ΔΔCq method (21).
Western blotting
Following treatment, whole cell lysates were acquired using RIPA lysis buffer (Beyotime Institute of Biotechnology). Protein concentration was quantified using a bicinchoninic acid Protein Assay kit (Pierce; Thermo Fisher Scientific, Inc.) and 20 µg protein was separated via 10% SDS-PAGE. The separated proteins were subsequently transferred onto nitrocellulose membranes and blocked in 5% non-fat milk for 2 h at room temperature. The membranes were then incubated with the following primary antibodies at 4˚C overnight: Anti-Bcl-2 (cat. no. ab32124; 1:1,000; Abcam), anti-Bax (cat. no. ab32503; 1:1,000; Abcam), anti-cleaved caspase-9 (cat. no. ab2324; 1:1,000; Abcam), anti-cleaved caspase-3 (cat. no. ab32042; 1:1,000; Abcam), anti-caspase 3 (cat. no. ab13847; 1:1,000; Abcam), anti-caspase-9 (cat. no. ab32539; 1:1,000; Abcam) and anti-GAPDH (cat. no. ab8245; 1:1,000; Abcam). Following primary antibody incubation, the membranes were incubated with horseradish peroxidase-conjugated secondary antibody (cat. no. 7074; 1:1,000; Cell Signaling Technology, Inc.) at room temperature for 2 h in the dark. Protein bands were visualized using an ECL Western Blotting Detection reagent (GE Healthcare) and densitometric analysis was performed using Image J software (v.1.52; National Institutes of Health).
ELISA
The cell supernatant was collected by centrifugation at 12,000 x g for 10 min at 4˚C and the concentrations of inflammatory cytokines were measured using interleukin (IL)-1β ELISA kit (cat. no. PI305; Beyotime Institute of Biotechnology), IL-6 ELISA kit (cat. no. PI330; Beyotime Institute of Biotechnology) and tumor necrosis factor (TNF)-α kit (cat. no. PT518; Beyotime Institute of Biotechnology) according to the manufacturers' protocols. All experiments were repeated in triplicate.
Dual luciferase reporter assay
The combination between SNHG14 and miR-181b-5p were predicted using StarBase 3.0 (https://starbase.sysu.edu.cn/index.php). Cells were seeded into 24-well plates at a density of 5x104 cells/well and cultured at 37˚C for 24 h. The fragment of SNHG14 containing the predicted wild-type (WT) or mutant (MUT) miR-181b-5p-binding sequences were amplified by Shanghai GenePharma Co., Ltd., and inserted into the pmirGLO luciferase reporter gene vector (Promega Corporation) to produce the reporter plasmids SNHG14-WT and SNHG14-MUT, respectively. Subsequently, the cells were co-transfected with SNHG14-WT/SNHG14-MUT and miR-181b-5p mimic/mimic-NC using Lipofectamine 2000 reagent for 24 h. The culture medium was then removed, and the cells were rinsed twice with PBS. The cells were added to the cell lysates, which were swirled for 10 min and centrifuged at 12,000 x g for 10 min at 4˚C, and the supernatant was subsequently transferred to a new Eppendorf tube. A dual luciferase kit (cat. no. D0010; Beijing Solarbio Science & Technology Co., Ltd.) was used to measure luciferase activity according to the manufacturer's protocol. Firefly luminescence and Renilla luminescence were detected by enzyme markers, and Renilla luminescence was used as internal reference.
Statistical analysis
Each experiment was performed three times and data are presented as the mean ± SD. Statistical analysis was performed using GraphPad Prism 5 software (GraphPad Software, Inc.). Statistical differences between groups were analyzed using one-way ANOVA with Tukey's test or Student's t-test. P<0.05 was considered to indicate a statistically significant difference.
Results
LPS induces PC-12 cell inflammatory injury
CCK-8 assay was performed to determine the dose of LPS to use for further experiments. As presented in Fig. 1A, PC-12 cell viability was barely affected following treatment with 1 µg/ml LPS, whilst treatment with 5 µg/ml LPS significantly decreased the cell viability compared with the control group. Therefore, 5 µg/ml LPS was used for subsequent experiments. TUNEL assay results revealed a significant increase in cell apoptosis in LPS-treated cells compared with controls (Fig. 1B). These findings were validated using western blotting, which revealed that compared with controls, the expression levels of Bcl-2 were significantly downregulated, while the expression levels of Bax, cleaved caspase-9 and cleaved caspase-3 were significantly upregulated following treatment with 5 µg/ml LPS (Fig. 1C and D). As presented in Fig. 1E, the secretory levels of pro-inflammatory factors, including IL-1β, IL-6 and TNF-α, were significantly increased in the 5 µg/ml LPS group compared with controls. These results suggested that LPS could induce PC-12 cell inflammatory injury.
Knockdown of SNHG14 alleviates LPS-induced inflammation and apoptosis of PC-12 cells
RT-qPCR analysis revealed that the expression levels of SNHG14 in PC-12 cells were significantly upregulated following treatment with 5 µg/ml LPS compared with controls (Fig. 2A). After constructing the interference plasmids and transfecting them into PC-12 cells, shRNA-SNHG14-1 demonstrated greater transfection efficiency compared with shRNA-SNHG14-2. Therefore, shRNA-SNHG14-1 was selected for use in subsequent experiments (Fig. 2B). PC-12 cells treated with LPS and transfected with shRNA-SNHG14 had significantly higher cell viability (Fig. 2C) and significantly lower cell apoptosis levels (Fig. 2D) compared with those treated with LPS alone. In addition, western blotting results revealed that the expression levels of Bcl-2 were significantly upregulated, while the expression levels of Bax, cleaved caspase-9 and cleaved caspase-3 were significantly downregulated in cells treated with 5 µg/ml LPS and transfected with shRNA-SNHG14 compared with the 5 µg/ml LPS group (Fig. 2E and F). ELISA results illustrated that the secretory levels of IL-1β, IL-6 and TNF-α in PC-12 cells following LPS treatment were significantly downregulated when the cells were also transfected with shRNA-SNHG14 (Fig. 2G). These results suggested SNHG14 knockdown may alleviate LPS-induced inflammation and apoptosis of PC-12 cells.
SNHG14 negatively regulates miR-181b-5p expression levels in PC-12 cells
To investigate the regulatory mechanism of SNHG14 in PC-12 cells, RT-qPCR analysis was conducted to determine the interaction between SNHG14 and miR-181b-5p. As presented in Fig. 3A, compared with the control, the mRNA expression levels of miR-181b-5p were significantly downregulated following treatment with 5 µg/ml LPS. However, the expression levels of miR-181b-5p in PC-12 cells were significantly upregulated following SNHG14 knockdown compared with the control group (Fig. 3B). Subsequently, a miR-181b-5p mimic was constructed and successfully transfected into PC-12 cells to overexpress miR-181b-5p, as presented in Fig. 3C. The expression levels of SNHG14 were significantly downregulated in PC-12 cells transfected with miR-181b-5p mimic compared with the control (Fig. 3D). The binding sites between SNHG14 and miR-181b-5p were subsequently predicted (Fig. 3E). Dual luciferase reporter assay results revealed that the relative luciferase activities of PC-12 cells did not change following co-transfection with mimic-NC + SNHG14-MUT or miR-181b-5p mimic + SNHG14-MUT; however, the relative luciferase activity was significantly decreased following co-transfection with miR-181b-5p mimic + SNHG14-WT (Fig. 3F). These findings indicated that SNHG14 may negatively regulate miR-181b-5p in PC-12 cells.
Knockdown of SNHG14 alleviates LPS-induced inflammation and apoptosis of PC-12 cells via upregulating miR-181b-5p expression levels
To confirm whether SNHG14 could reverse inflammation and apoptosis in PC-12 cells through the newly identified regulatory mechanism, a CCK-8 assay was performed. The results revealed that the decreased cell viability induced by LPS stimulation was rescued following transfection with shRNA-SNHG14, while the addition of the miR-181b-5p inhibitor significantly decreased cell viability (Fig. 4A). In addition, as presented in Fig. 4B, cell apoptosis was significantly decreased following stimulation with LPS and transfection with shRNA-SNHG14, while co-transfection with shRNA-SNHG14 and miR-181b-5p inhibitor into LPS-treated cells attenuated cell apoptosis. The downregulated expression levels of Bcl-2 and upregulated expression levels of Bax, cleaved caspase-9 and cleaved caspase-3 induced by 5 µg/ml LPS were reversed by SNHG14 knockdown (Fig. 4C and D). However, miR-181b-5p inhibition suppressed the effects of SNHG14 knockdown in LPS-induced cells. As presented in Fig. 4E, the secretory levels of proinflammatory factors IL-1β, IL-6 and TNF-α were downregulated following stimulation with LPS and transfection with shRNA-SNHG14. However, following LPS stimulation, the secretory levels of these inflammatory factors were increased when the cells were co-transfected with shRNA-SNHG14 and miR-181b-5p inhibitor compared with those transfected with shRNA-SNHG14 alone. These results suggested that SNHG14 knockdown may upregulate the expression levels of miR-181b-5p and subsequently attenuate LPS-induced inflammation and apoptosis of PC-12 cells.
Discussion
Despite progress being made in understanding the basic neurobiology of SCI, strategies available for the treatment of SCI remain limited (22). Current clinical treatments, including surgical procedures and high-dose methylprednisolone, can improve the overall survival rate of patients, but they cannot repair nerve function that has been damaged (23). In the present study, the role of lncRNA SNHG14 in LPS-induced PC-12 cells was investigated, in addition to its potential mechanism, with the aim to provide a novel strategy for the treatment of SCI.
lncRNAs serve a role in various fundamental biochemical and cellular processes and have emerged as pivotal regulators that can enhance neural regeneration in the development of SCI (24). Moreover, the expression levels of certain lncRNAs, such as SNHG5 and tectonic family member 2, have been discovered to be upregulated in SCI (25,26). Therefore, therapies that target lncRNAs may hold promise for the treatment of SCI (27). SNHG14 is located within the Prader-Willi critical region and extends into the region of the ubiquitin protein ligase E3A gene, whose deficiency in brain cells in children was revealed to contribute to neurogenetic disorders (28). A previous study has verified that SNHG14 may aggravate inflammation in cerebral ischemia/reperfusion injury by damaging the miR-136-5p-dependent inhibition of ROCK1(15). It is well known that inflammation is one of the most common features in the occurrence of the SCI (29). Therefore, it was hypothesized that SNHG14 may also induce the development of SCI. In the present study, inflammatory injury following SCI was stimulated in cells by LPS treatment, and the results revealed that the expression levels of SNHG14 were upregulated following LPS stimulation compared with the control group. Following the subsequent construction of interference plasmids targeting SNHG14 and transfection into PC-12 cells, it was observed that SNHG14 knockdown could rescue cell viability under an LPS-induced inflammatory environment. Since the sub-acute phase of secondary SCI is involved in apoptosis, the expression levels of apoptosis-related proteins in PC-12 cells were analyzed (30). The results revealed that the genetic silencing of SNHG14 could reduce cell apoptosis and alleviate inflammation. These findings suggested that SNHG14 may facilitate the progression of SCI, which was consistent with the findings of Jiao et al (31), who reported that SNHG14 participated in the deterioration of non-small cell lung cancer.
Using advanced high-throughput sequencing technologies, a large number of differentially expressed genes (lncRNA LINRIS, lncRNA HOXA-AS2 and lncRNA ZNF667-AS1), which participated in the development of various types of disease, have been identified (32-34). Previous research has also noted the role of miRNAs following SCI and suggested that they could be novel biomarkers for the diagnosis, treatment and prognosis of such injuries (35). Accumulating evidence has verified that miRNAs can regulate their expression and subsequent biological functions by interacting with lncRNAs (36). LncRNAs have been found to exert their effects by targeting or sponging miRNAs in various types of cancer (37-40). However, whether lncRNAs could sponge or target a certain miRNA in SCI remain to be determined. The present study used StarBase 3.0 software to predict that miR-181b-5p, a member of the miR-181 family, was a target of SNHG14. Indeed, the genetic knockdown of SNHG14 upregulated miR-181b-5p expression levels, while SNHG14 expression levels in PC-12 cells transfected with a miR-181b-5p mimic were downregulated, indicating the negative regulatory role of SNHG14 on miR-181b-5p expression levels. Furthermore, miR-181b-5p was discovered to promote cell viability and inhibit the apoptosis of PC-12 cells.
In conclusion, the results of the present study suggested that SNHG14 may serve as a pathogenic lncRNA in PC-12 cells, as the genetic knockdown of SNHG14 alleviated LPS-induced inflammation and apoptosis of PC-12 cells by negatively regulating miR-181b-5p expression levels. These results may provide a novel perspective for future therapeutic strategies for SCI. However, the present study is that only performed in vitro experiments. Future studies will involve in vivo experiments and assess other underlying mechanisms.
Acknowledgements
Not applicable.
Funding
No funding was received.
Availability of data and materials
The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
Authors' contributions
YX conceived and designed the experiments. HJ and JN performed all the experiments and YZ helped HJ and JN to collect experimental data. HJ and JN authenticated the raw data in this study. YZ performed the statistical analysis. HJ and JN wrote the paper together which was revised and polished by YX. All authors reviewed and approved the final manuscript.
Ethics approval and consent to participate
Not applicable.
Patient consent for publication
Not applicable.
Competing interests
The authors declare that they have no competing interests.
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