MicroRNA-135b promotes proliferation, invasion and migration of osteosarcoma cells by degrading myocardin
- Authors:
- Published online on: September 4, 2014 https://doi.org/10.3892/ijo.2014.2641
- Pages: 2024-2032
Abstract
Introduction
Although osteosarcomas have been treated with chemotherapy for >30 years, patients with recurrent or metastatic osteosarcomas still have very poor prognosis (1–3). Finding new strategies to treat recurrent or metastatic osteosarcoma remains an important but unmet clinical need.
Myocardin has been reported to be a key regulator of cardiac and smooth muscle differentiation and its expression is restricted to smooth and cardiac muscle lineages (4). Myocardin drives transcription through the interaction with the MADS box-containing transcription factor, serum response factor (SRF), which binds to a consensus DNA sequence, CC[A/T]6GG (CArG box) (5,6). In addition, myocardin functions as an effective inducer of growth arrest and differentiation of some tumor and is frequently repressed during human malignant transformation (7). Although the importance of myocardin in cardiac and smooth muscle has firmly established, its role in osteosarcomas is poorly understood, let alone why it cannot be expressed in osteosarcoma.
Recently, deregulation of expression of several miRNAs has been identified between osteosarcoma samples and normal human osteoblasts as well as several important studies have focused on the impact of microRNAs (miRNA, miR) on tumorigenesis and progression of osteosarcoma (8–13). The expression of miR-135b is upregulated in osteosarcoma (8) and miR-135b functions as an oncogene in other malignant tumors suggesting that it might be a target for malignant tumor therapy (14–18), but its roles still keep emerging in osteosarcoma.
Our results demonstrated that myocardin expression is specifically attenuated in osteosarcoma MG63 cells. We next performed an analysis of potential microRNA target sites employing 3 commonly used prediction algorithms, miRanda, TargetScan and miRDB. All 3 algorithms predicted that miR-135a and miR-135b can target 3′UTR of myocardin. However, results of microarray assay and real-time PCR showed that only miR-135b was significantly upregulated in osteosarcoma tissues. Thus, we reasoned that due to the overexpression of miR-135b, myocardin was suppressed or degraded by miR-135b in osteosarcoma. Following experiments showed that miR-135b degraded myocardin mRNA through targeting its 3′UTR in osteosarcoma MG63 cells. Moreover, miR-135b promoted proliferation, invasion and migration of MG63 cells. Finally, we found that myocardin has the opposite effects of miR-135b, which suppressed proliferation, migration and invasion in MG63 cells. Thus, it is probably that miR-135b promotes proliferation, invasion and migration of osteosarcoma cells by degrading myocardin.
Materials and methods
Cell culture and expression plasmids
MG63 human osteosarcoma cells were maintained in minimum essential medium (Life Technologies, Inc., Carlsbad, CA, USA) containing 10% fetal bovine serum, 1% non-essential amino acids, and 1% penicillin/streptomycin. A7r5 cells were maintained as described previously (19). All expression plasmids were purchased from Tiangene (Tianjin, China). Briefly, the pcDNA3.1-myocardin contains 3′UTR of myocardin (1214nt) and a cDNA encoding amino acids 1-935 of mouse myocardin, named myocardin-WT. Site-directed mutagenesis of the miR-135b target-site in the myocardin-3′UTR was carried out using Quik change-mutagenesis kit (Stratagene, Heidelberg, Germany), myocardin-WT as a template. For transfection experiments, the cells were cultured in serum-free medium without antibiotics at 60% confluence for 24 h, and then transfected with transfection reagent (Lipofectamine 2000, Invitrogen, Carlsbad, CA, USA) according to the manufacturer’s instructions. After incubation for 6 h, the medium was removed and replaced with normal culture medium for 48 h.
miRNA precursors, anti-miRNA oligonucleotides
The locked nucleic acid (LNA)-modified oligonucleotide inhibitors (anti-miR-135b) used for miRNA knock-down and scramble were purchased from Exiqon. The miR-135b miRNA precursor (pre-miR-135b) and a control precursor (scramble) were purchased from Ambion, Inc.
Reverse transcription-polymerase chain reaction
Total RNA was isolated from cells using TRIzol reagent (Invitrogen). cDNA was synthesized from 1 μg of total RNA in a 20-μl reverse transcription (RT) system followed by PCR amplification in a 50-μl PCR system performed using an RT-PCR kit (Promega, Madison, WI, USA). Housekeeping gene glyceraldehyde-3-phosphate dehydrogenase (GAPDH) was used as RNA loading control. The PCR primer sequences are as follows: myocardin: 5′-GGACTGCTCTGGCAACCCAGTGC′; 5′-CATCTGCTGACTCCGGGTCATTTGC-3′. The PCR was conducted according to the manufacturer’s instructions and the PCR products were analyzed by agarose gel electrophoresis. Gels were photographed and densities of the bands were determined with a computerized image analysis system (Alpha Innotech, San Leandro, CA, USA). The area of each band was calculated as the integrated density value (IDV). Mean values were calculated from three separate experiments. The IDV ratio of myocardin to GAPDH was calculated for each sample.
Cell counting assay
Forty-eight hours after transfection, MG63 cells were seeded in 96-well plates in triplicate at a density of 5×103 cells/well in 100 μl of RPMI-1640 medium containing 10% FBS and antibiotics. Cell proliferation was evaluated using Cell Counting Kit-8 (Dojindo Lab, Kumamoto), according to the manufacturer’s instructions and the absorbance value for each well was measured at 450 nm using a microplate reader (Spectra Max 180, Molecular Devices).
MTT assay
The effect on the cell proliferation was assessed by 3-(4, 5-dimethylthiazol-2-yl)-2, 5-diphenyltetrazolium (MTT; Sigma, St. Louis, MO, USA) assay was performed as described before (20). Absorbance was directly proportional to the number of survival cells.
BrdU proliferation analysis
Cell proliferation was assessed by using a colorimetric BrdU proliferation kit according to the manufacturer’s instructions (Roche, Indianapolis, IN, USA). The cells transfected with myocardin or empty vector or pre-miR-135b or anti-miR-135b were labeled with BrdU for 3–4 h. The genomic DNA was fixed and denatured, and then incubated with peroxidase-conjugated anti-BrdU antibody for 90 min. A substrate for the conjugated peroxidase was then added and the reaction product was quantified by measuring the absorbance. The results were then normalized by the number of total viable cells.
Migration and invasion assay
For Transwell migration assays, 2.5×104–5.3×104 cells were plated in the top chamber with the non-coated membrane (24-well insert; pore size, 8 mm; BD Biosciences). For invasion assays, 1.25×105 cells were plated in the top chamber with Matrigel-coated membrane (24-well insert; pore size, 8 mm; BD Biosciences). In both assays, cells were plated in medium without serum or growth factors, and medium supplemented with serum was used as a chemoattractant in the lower chamber. The cells were incubated for 24 h and cells that did not migrate or invade through the pores were removed by a cotton swab. Cells on the lower surface of the membrane were stained with the Diff-Quick Staining Set (Dade) and counted.
Western blot analysis
Western blot analysis was performed as described before (21). Antibodies used are listed in Table I.
miRNA microarray
Total RNA from cultured cells, with efficient recovery of small RNAs, was isolated using the mirVana miRNA Isolation kit (Ambion, Austin, TX, USA). cRNA for each sample was synthesized by using 3′ IVT Express kit (Affymetrix) according to the manufacturer’s protocols. The purified cRNA was fragmented by incubation in fragmentation buffer (provided in the 3′IVT express kit) at 95°C for 35 min and chilled on ice. The fragmented labeled cRNA was applied to MicroRNA2.0 array (Affymetrix) and hybridized in Genechip hybridization oven 640 (Affymetrix) at 45°C for 18 h. After washing and staining in Genechip fluidics station 450 (Affymetrix), the arrays were scanned by using Genechip scanner 3000 (Affymetrix). The gene expressions levels of samples were normalized and compared by using Partek GS 6.5 (Partek). Average-linkage hierarchical clustering of the data was applied by using the Cluster and the results were displayed by using TreeView.
Real-time PCR
Total RNA from cultured cells, with efficient recovery of small RNAs, was isolated using the mirVana miRNA Isolation kit (Ambion). Detection of the mature form of miRNAs was performed using the mirVana qRT-PCR miRNA Detection kit and qRT-PCR primer sets, according to the manufacturer’s instructions (Ambion). The U6 small nuclear RNA was used as an internal control.
Gene microarray
Preparation of RNA from cells and analysis of Affymetrix gene chip microarray data were as previously described (22). Total RNA was prepared using TRIzol reagent (Invitrogen) according to the manufacturer’s instructions. RNA was further purified using RNeasy columns (Qiagen, Chatsworth, CA, USA) and treatment with RNase-free DNase I (Qiagen). Total RNA was used to generate cRNA, which was labeled with biotin as recommended by Affymetrix. cRNA was then hybridized to Affymetrix Hu95A GeneChips, which contain ~12,000 human oligonucleotide probe sets. After washing, the chips were scanned and analyzed using Microarray Suite 5.0 (Affymetrix). Average intensities for each Gene Chip were globally scaled to a target intensity of 150. Further analysis was performed using Gene Spring software version 5.0.1 to obtain expression level information, fold change, and P-values for each gene relative to control.
Luciferase reporter assay
The 3′ untranslated region (3′UTR) of human myocardin mRNA was cloned in between the Not1 and Xba1 sites of pRL-TK (Promega) using PCR-generated fragment. Site-directed mutagenesis of the miR-135b target-site in the myocardin-3′UTR was carried out using Quik change-mutagenesis kit (Stratagene), with myocardin-WT-luc as a template. For reporter assays, MG63 was transiently transfected with WT or mutant reporter plasmid and microRNA using Lipofectamine 2000 (Invitrogen). Reporter assays were performed 36 h post-transfection using the Dual-luciferaseassay-system (Promega), normalized for transfection efficiency by cotransfected Renilla-luciferase.
Northern blot analysis
Northern blot analysis of miRNAs, were performed as described previously (23). Probes were labeled with [γ-32P]-ATP complementary to miR-135b and U6 snRNA.
Results
Myocardin expression is specifically attenuated in osteosarcoma MG63 cells
To identify the level of myocardin expression, we performed RT-PCR and western blotting in A7r5 cells (as a positive control) as well as MG63 cells. We could not detect any myocardin mRNA (Fig. 1A) and protein expression (Fig. 1B) in MG63 cells, although stable expression of myocardin could be detected in A7r5 cells. Because myocardin functions as an effective inducer of growth arrest and differentiation of some tumor and is frequently repressed during human malignant transformation (7), we reasoned that the defect of myocardin was associated with pathogenesis and progression of osteosarcoma. To test this hypothesis and study biological effects of myocardin, we transfected MG63 cells with myocardin-WT expression plasmids. Although myocardin protein was significantly increased by myocardin-WT plasmids in A7r5 cells (Fig. 1C), we did not detect any protein expression of myocardin in MG63 cells (Fig. 1D).
Myocardin as a potential target of miR-135b in osteosarcoma MG63 cells
Having demonstrated that myocardin expression is specifically attenuated in MG63 cells and myocardin-WT plasmids cannot be expressed in the cells, we investigated the mechanisms inhibiting myocardin expression. MicroRNAs (miRNAs) are a new class of small (~22 nucleotide) non-coding RNAs that negatively regulate protein-coding gene expression by targeting mRNA degradation or translation inhibition (24). Thus, we considered that myocardin was degraded by miRNA.
As a further confirmation, we used 3 common prediction algorithms - miRanda (http://www.microrna.org/), TargetScan (http://www.targetscan.org) and miRDB (http://mirdb.org/miRDB/index.html) to analyze 3′UTR of myocardin. All 3 algorithms predicted that miR-135a and miR-135b could target 3′UTR of myocardin (Fig. 2A) and the predicted target is shown in Fig. 2B. We also performed microRNA profiling and real-time PCR to detect and analyze the difference of miRNA profiling in A7r5 cells (myocardin-positive cells) and MG63 cells (myocardin-negative cells). The results of the microarray (Fig. 2C) showed that miR-135b expression was significantly upregulated in MG63 cells. To confirm the results of microarray, we performed real-time PCR to analyze the level of miR-135b expression between A7r5 cells and MG63 cells. Consistent with the results of microarray, real-time PCR showed that miR-135b expression was significantly upregulated in MG63 cells (Fig. 2D). All the results make us reason that it is probable that downregulation of myocardin was associated with miR-135b overexpression in MG63 cells.
Silencing miR-135b restores the expression of myocardin and miR-135b inhibits myocardin expression by targeting its 3′UTR in osteosarcoma MG63 cells
To examine whether myocardin was indeed regulated by miR-135b, we transfected MG63 cells with anti-miR135b, in which endogenous myocardin is undetectable by RT-PCR and western blotting. Our results showed that anti-miR-135b effectively inhibited miR-135b expression in MG63 cells (Fig. 3A). We next performed RT-PCR and western blotting to detect myocardin expression in MG63 cells transfected with anti-miR-135b. The results showed that myocardin mRNA (Fig. 3B) and myocardin protein (Fig. 3C) were significantly upregulated in MG63 cells transfected with anti-miR-135b. To further demonstrate the direct regulation of myocardin by miR-135b, we constructed luciferase reporters with the targeting sequences of wild-type (myocardin-WT-luc) and mutated myocardin 3′UTRs (myocardin-MUT-luc) (Fig. 3D). Both the wild-type and mutant reporters were introduced into MG63 cells (miR-135b high expression) and A7r5 cells (miR-135b low expression). The luciferase activities of myocardin-WT-luc but not myocardin-MUT-luc were significantly suppressed in MG63 cells but not in A7r5 cells (Fig. 3E).
To detect whether miR-135b targets 3′UTR of myocardin, luciferase assay was performed. Our results showed that miR-135b inhibited myocardin-WT-luc plasmids, but not myocardin-MUT-luc plasmids (Fig. 3F). To further confirm that miR-135b can target the sites of 3′UTR of myocardin as predicated, we transfected MG63 cells with anti-miR-135b. The results demonstrated that silencing miR-135b was able to increase luciferase activity of 3′UTR of myocardin-WT-luc in MG63 cells, but not myocardin-MUT-luc (Fig. 3G). All the results indicated that miR-135b directly targeted the sites of 3′UTR of myocardin as predicted by the bioinformatics methods.
In order to further demonstrate that miR-135b inhibits myocardin expression through targeting its predicted sites of 3′UTR, we purchased myocardin expression plasmids containing predicted sites of 3′UTR (myocardin-WT) and mutated the 6 bases predicted in its 3′UTR (myocardin-MUT) (Fig. 3H). Both the wild-type and mutant expression plasmids were introduced into MG63 cells (myocardin-negative) and then RT-PCT and western blotting were performed to detect the expression of myocardin. The results showed that only myocardin-MUT significantly increased myocardin mRNA (Fig. 3I) and its protein expression (Fig. 3J) in MG63 cells, indicating that miR-135b indeed inhibited myocardin expression by targeting its 3′UTR.
miR-135b are highly expressed in osteosarcoma tissues and it promotes MG63 cells proliferation, migration and invasion
Having demonstrated that silencing miR-135b restores the expression of myocardin and miR-135b inhibits myocardin expression by targeting its 3′UTR in MG63 cells. We considered that miR-135b played an important role in MG63 cells. Thus, in an attempt to identify the level of miR-135b expression in osteosarcoma and normal tissues, we performed miRNA profiling in osteosarcoma tissues. RNAs isolated from 6 pairs of osteosarcoma tissue and matched adjacent normal tissue samples were hybridized to a custom miRNA microarray platform. After three hybridizations, quantification, and normalization, we found that miR-135b, was elevated in the primary tumors compared with normal tissues (Fig. 4A).
To further assess the expression of miR-135b in osteosarcoma, northern blot analysis was conducted in 6 pairs of osteosarcoma tissue and matched adjacent normal tissue samples. The expression of miR-135b was consistently higher in osteosarcoma tissues than in normal tissues (Fig. 4B). Consistent with the miRNA microarray data and northern blot analysis, real-time PCR analysis also revealed the expression of miR-135b in the primary tumors compared with normal tissues was elevated (Fig. 4C).
To determine whether miR-135b overexpression would affect cell proliferation, we transfected MG63 cells with pre-miR-135b, and then real-time PCR was performed to detect miR-135b expression in the cells. The results showed that miR-135b expression was effectively increased by pre-miR-135b in MG63 cells (Fig. 4D). MTT assays were performed and the results showed that pre-miR-135b could promote proliferation of MG63 cells (Fig. 4E). Consistent with the results of MTT assay, transfection of MG63 cells with pre-miR-135b increased BrdU incorporation in the cells (Fig. 4F). We had showed that anti-miR-135b could significantly decrease the expression of miR-135b in MG63 cells (Fig. 3A). To further confirm the relationship of miR-135b and proliferation, we performed MTT assay and BrdU incorporation assay and the results showed that silencing miR-135b led to a >2.5-fold reduction in the proliferation properties (Fig. 4G) and DNA synthesis of these cells (Fig. 4H).
To determine whether miR-135b would increase the basal levels of cell migration or invasion, we overexpressed miR-135b in MG63 cells. In MG63 cells, ectopic expression of miR-135b resulted in a four- to five-fold increase in cell migration (Fig. 5A) and invasion (Fig. 5A). These results indicated that overexpression of miR-135b is sufficient to promote both migration and invasion in vitro. Consistent with the results of miR-135b overexpression, silencing miR-135b led to ~4-fold reduction in the migration and invasion of these cells, as gauged by Transwell migration assay (Fig. 5B) and Matrigel invasion assay (Fig. 5B).
Myocardin suppresses proliferation, migration and invasion in MG63 cells
Having demonstrated the miR-135b can promote proliferation, migration and invasion of MG63 cells and that knockdown of miR-135b can restore myocardin expression, we reasoned that myocardin had the opposite effects of miR-135b in MG63 cells. To determine whether myocardin expression in the MG63 cells would also affect cell proliferation, migration and invasion, we performed cell counting assay in MG63 cells transfected with myocardin-MUT. We observed a dose-dependent suppression of MG63 cell proliferation (Fig. 6A). Consistent with cell counting assay, MTT assay showed that myocardin suppressed cell proliferation in a dose-dependent manner (Fig. 6B). To further confirm that myocardin can inhibit MG63 cell proliferation, BrdU incorporation assay was performed. The results showed that myocardin inhibited BrdU incorporation in a dose-dependent manner in MG63 cells (Fig. 6C). We next performed gene profiling to search for proliferation-associated genes, and found that CDK1, CDK2, c-myc and Ki67 were significantly downregulated and p27 and p53 were also downregulated in myocardin-MUT transfected groups (Fig. 6D). To further confirm the regulation of CDK1, CDK2, p27, P53, c-myc and Ki67 by myocardin, we performed western blotting to analyze CDK1, CDK2, p27, p53, c-myc, PCNA and Ki67 protein expression in MG63 cells transfected with myocardin-MUT. Our results showed that myocardin-MUT significantly inhibited CDK1, CDK2, c-myc and Ki67 protein expression in MG63 cells (Fig. 6E).
We next identified whether restoration of myocardin affected migration and invasion of MG63 cells. Transwell migration assay and Matrigel invasion assay were performed and the results showed that myocardin-MUT significantly inhibited migration and invasion (Fig. 6F).
Discussion
Deregulated expression of miR-135b in osteosarcoma
miR-135b levels are elevated in a variety of cancers including breast, non-small cell lung cancer (NSCLC), prostate, and colon as well as its upregulation is far more robust in highly invasive lines compared to the less invasive in NSCLC (25–27). Overexpression of miR-135b conferred an increased tumorigenic ability to the relatively benign CL1-0 cells, resulting in >4-fold greater tumor burden in xenograft mouse models. In vivo, stable expression of a miR-135b antagonist decreased the number of metastatic tumor nodules in mice injected with highly invasive CL1-5-F4 cells shown to have high levels of miR-135b (15). Clinically, high levels of miR-135b in lung cancer specimens significantly correlated with decreased overall survival (15). Although the expression of miR-135b is upregulated in osteosarcoma and miR-135b functions as an oncogene in other malignant tumors suggesting that it might be a target for malignant tumor therapy, its roles still keep emerging in osteosarcoma. We showed that miR-135b inhibited proliferation, migration and invasion and silencing its expression restored myocardin expression in MG63 cells. Due to the overexpression of miR-135b, myocardin mRNA was degraded in MG63 cells. Next we will study the roles of miR-135b in vivo.
Myocardin as a tumor suppressor in osteosarcoma
Myocardin has been reported to be a key regulator of cardiac and smooth muscle differentiation and its expression is restricted to smooth and cardiac muscle lineages (4). Myocardin drives transcription through the interaction with the MADS box-containing transcription factor, serum response factor (SRF), which binds to a consensus DNA sequence, CC[A/T]6GG (CArG box) (5,6). In addition, myocardin functions as an effective inducer of growth arrest and differentiation of some tumors and is frequently repressed during human malignant transformation (7). Although the importance of myocardin in cardiac and smooth muscle has been firmly established, its role in osteosarcoma is still keep emerging. In this study, we found that myocardin, as a suppressor gene, inhibited proliferation, migration and invasion of MG63 cells. To further confirm the roles of myocardin, its roles in vivo need to be studied.
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