Quantitative volumetric assessment of the solid portion percentage on CT images to predict ROS1/ALK rearrangements in lung adenocarcinomas
- Authors:
- Published online on: July 6, 2020 https://doi.org/10.3892/ol.2020.11816
- Pages: 2987-2996
Abstract
Introduction
The discovery and use of tyrosine kinase inhibitors (TKI) specifically targeting epidermal growth factor receptor (EGFR) in the management of non-small-cell lung cancer (NSCLC) in 2004 spearheaded the development of the molecular pathology classification for lung cancer and targeted therapies (1,2). Soda et al (3) revealed the presence of a hybrid gene borne as a result of anaplastic lymphoma kinase (ALK) gene chromosomal rearrangement. Furthermore, Rikova et al (4) characterized c-ros oncogene 1 (ROS1) rearrangement in NSCLC tumors. The molecular pathology-based classification has significantly increased the efficacy of targeted tyrosine kinase inhibitors in comparison with standard chemotherapy.
Crizotinib is an ALK TKI and was successful in gaining approval as a therapeutic agent for advanced NSCLCs with ALK and ROS1 rearrangement (5–8). Indeed, ALK and ROS1 genes share similar properties in terms of their amino acid sequence of the kinase domain and the adenosine triphosphate binding site. This similarity provided a basis for the properties of crizotinib in combating NSCLCs that possess these gene fusions. The phase I PROFILE 1001 study of crizotinib included 50 patients with ROS1-rearranged NSCLC who achieved a median progression-free survival (PFS) of 19.3 months and a median overall survival (OS) of 51.4 months with crizotinib treatment, with an objective response rate of 72% (8). This efficacy rate was much better than that for traditional chemotherapy, further highlighting the importance of genetic mutation detection in guiding NSCLC treatment. However, limited tissue samples are usually obtained, given the extremely invasive procedures necessary to procure them (lung biopsy and bronchoscopy). This reason coupled with the high cost of genetic testing frequently lead to numerous patients not undergoing genetic testing at all. Furthermore, testing for ROS1 rearrangements is frequently not performed, as they have been detected in only a low proportion of patients with NSCLC (0.9–2%). Therefore, there is an urgent requirement for a non-invasive and low-cost method to distinguish ROS1/ALK-rearranged patients from EGFR-mutated or wild-type (WT) patients to facilitate the selection of individualized treatment strategies. In this regard, it has been indicated that the clinical and imaging characteristics of patients with NSCLC may be able to predict their genetic status.
ALK rearrangements are typically encountered in patients with lung adenocarcinoma. These patients frequently have no history or a history of light smoking and are generally young (9–12). Solid-pattern growth on CT, an elevated glucose metabolism on positron-emission tomography (PET)/CT and relatively more rapid metastasis to lymph nodes or distant sites on PET/CT have been reported to be the primary radiological features of ALK-rearranged tumors compared with non-ALK-rearranged tumors in previous studies (12–14). A previous study by our group has highlighted the different imaging features between ALK-rearranged NSCLC, EGFR-mutated NSCLC and WT NSCLC, and noted that solid patterns were the predominant distinct features of ALK-rearranged tumors compared with other tumors (13).
In addition to ALK rearrangement, ROS1 rearrangement detection and targeted therapies have also been studied. Several studies have discussed the clinical and pathological features of NSCLC tumors with or without ROS1 rearrangement (15,16). There are a number of studies on the radiological characteristics of tumors with ROS1 rearrangement compared with tumors with other gene statuses. Digumarthy et al (17) indicated that ROS1-rearranged tumors more frequently displayed features of lymphangitic carcinomatosis (ROS1-rearranged, 42%; EGFR-mutated, 12%; P<0.01), had a lower chance of developing lymphangitic carcinomatosis and were more likely to have air bronchograms present in the primary tumor (ROS1-rearranged, 2%; EGFR-mutated, 28%; P<0.01). The above study qualitatively described the radiographic features, while the present study performed a quantitative volumetric analysis to evaluate the imaging features in lung adenocarcinoma with different gene statuses.
The present retrospective study aimed to assess the ability of PSV (also in combination with other clinical parameters) to predict the ROS1/ALK rearrangement status in lung adenocarcinoma in order to facilitate the specific targeted treatment.
Materials and methods
Patient selection and grouping
All procedures of the present study involving human participants were performed in strict compliance with the ethical standards of the institutional research committee and with the 1964 Helsinki declaration and its later amendments or comparable ethical standards. The ethics committee of the First Affiliated Hospital of Zhejiang University (Hangzhou, China) approved the study and waived the requirement for obtaining informed consent.
For all patients included, CT images had been obtained at the First Affiliated Hospital of Zhejiang University (Hangzhou, China). Clinical data were obtained from the medical records of each patient retrospectively. The TNM classification was also extracted and TNM staging was based on the seventh edition of the Union for International Cancer Control and American Joint Committee on Lung Cancer (18).
Confirmation of ROS1 rearrangement through real-time PCR
A 4-µm thick formalin-fixed (at 25°C for 12–24 h), paraffin-embedded (FFPE) tissue slice was used to evaluate ROS1 and ALK gene rearrangement. A total of three 5-µm sections of each tumor were used for total RNA extraction, which was performed based on predefined protocols (19) (RNeasy FFPE kit; Qiagen GmbH). The ROS1 rearrangement status was determined by multiplex real-time PCR in a Stratagene Mx3000P real-time PCR system (Stratagene Corp.) with an AmoyDx® ROS1 fusion gene detection kit (Amoy Diagnostics Co., Ltd.). ROS1 fusion combinations, including SLC34A2-ROS1, EZR-ROS1, CD74-ROS1, SDC4-ROS1, LRIG3-ROS1, TPM3-ROS1 and GOPC-ROS1, were detected in this assessment. The internal reference gene (β-actin) was used as a negative control and a confirmed ROS1-rearranged DNA was used as a positive control in the AmoyDx® ROS1 Gene Fusions Detection kit (cat. no. 8.01.23201W012A; Amoy Diagnostics Co., Ltd.).
Confirmation of ALK rearrangement using fluorescence in situ hybridisation (FISH)
ALK gene fusion was evaluated with FISH utilizing an ALK break-apart probe (Vysis LSI ALK Dual Color, Break Apart Rearrangement Probe; Abbott Molecular), in accordance with previously published protocols (13).
EGFR mutation analysis using pyrosequencing assay
A PCR-based pyrosequencing assay was used to analyze EGFR mutations located on exons 18–21 (20). The PyroMark system (Qiagen GmbH) was used to perform sequence analysis.
CT imaging
Each patient received thoracic CT scans with either the 64-slice Brilliance, 256-slice iCT (Philips Medical Systems, Inc.) or 64-slice light-speed VCT (GE Healthcare). CT scan systems had the following parameters: Rotation speed, 0.5/sec; pitch, 1; 120 kV; 120–380 mA; field of view, 300–350 mm; and collimation, 0.625 mm. A high-frequency reconstruction algorithm with a 512×512 matrix was used for image reconstruction. The reconstruction thicknesses and intervals were 5.0 and 5.0 mm, respectively. CT imaging information was reviewed in a Philips CT workstation using the mediastinal window setting [width, 200 Hounsfield Units (HU); level, 40 HU] and lung window setting (width, 1,500 HU; level, 500 HU), which were obtained prior to contrast administration.
Interpretations of CT images
All CT images were independently reviewed by JL and JX, two radiologists with 10 years of experience. The radiologists were not blinded to the patients' diagnoses of lung adenocarcinoma but were blinded to their genetic statuses. The presence or absence of multiple lesions, lobulated borders, fine spiculated margins, bubble-like lucency, cavity, liquefaction necrosis and air bronchogram were assessed.
Multiple lesions were defined as more than one tumor lesion on a CT scan. A lobulated border was defined as a shallow wavy configuration seen on part of the border of the lesion, excluding lesions that were abutting the pleura (13,20–22). A lesion that possessed fine linear strands extending 1–2 mm radially was defined as having fine spiculated margins. Lesions that possessed air attenuation spots within them were classified as having bubble-like lucency (13,20) and a cavity was defined as a gas-filled space appearing as an area of lower attenuation or lucency (21). A hypodense area on non-enhanced and contrast-enhanced CT images was defined as liquefaction necrosis (23). An air bronchogram was defined as an air-filled (low-attenuation) bronchus against an opaque background (high-attenuation) (13,21).
Quantitative volumetric assessment
Lung nodule reconstruction was performed using the 256-slice iCT (Philips Medical Systems), which allowed for the quantification of the volume of individual lesions. The software is able to automatically generate solid tumor boundaries on each cross-section, while extracting intramodular bronchial and cavitating structures in order to reconstruct a three-dimensional structure of the nodule and provide data on the volume (V) and estimated diameter (D) (Fig. 1). For mixed tumor nodules with solid and ground-glass opacity (GGO) portions (Fig. 2A and B), as well as for the entire nodule (Fig. 2C), all computer-derived boundaries were assessed and adjusted as necessary by the two experienced radiologists. The software reconstructed the three-dimensional structure of the nodule and provided data on the entire nodule and the solid portion (Fig. 2D). The radiologists recorded the volume and the estimated diameter mentioned above for the total nodule (tV, tD) and the solid portion (sV, sD). The PSV was calculated using the formula PSV=sV/tV.
Statistical analysis
The patients with different gene status' were included in different groups via a simple randomization method (Fig. 3). A Chi-squared test was used to compare categorical variables. For continuous variables, including age, tV, tD and PSV, differences in median values between two groups were compared by the Mann-Whitney U-test, while the Kruskal-Wallis U-test was used for comparisons among four groups. The univariate and multivariate logistic regression analyses were performed to predict ROS1/ALK-rearranged. Variates with P≤0.10 in the univariate analysis were included in a multivariable logistic regression analysis. A receiver operating characteristic (ROC) analysis was carried out to evaluate the predictive value of PSV and the multi-factor (all independent predictive factors selected by multivariate analysis) predictive model to predict ROS1 rearrangement or ROS1/ALK rearrangement. All statistical analyses were performed using SPSS version 17.0 (SPSS, Inc.). P<0.05 was considered to indicate statistical significance.
Results
Clinical characteristics of patients with lung adenocarcinoma with different gene statuses
In the present study, 28 ROS1-rearranged, 578 EGFR-mutated and 71 ALK-rearranged patients were retrospectively identified among 1,120 patients with histology-confirmed lung adenocarcinoma diagnosed at the First Affiliated Hospital of Zhejiang University (Hangzhou, China) between March 2008 and October 2015. The 28 ROS1-rearranged patients were assigned to the ROS1 rearrangement group (ROS1 rearrangement group or ROS1+ group; n=28). Furthermore, 56 ALK-rearranged patients were randomly selected from the 71 ALK-rearranged patients (ALK rearrangement group or ALK+ group; n=56), as well as 112 patients with EGFR mutations from the 578 EGFR-mutated patients (EGFR mutation group or EGFR+ group; n=112) and 112 patients from those who exhibited the WT for all three genes (WT group; n=112). The patient selection procedure is presented in Fig. 3. The EGFR mutation group included 65 patients with EGFR 19 exon mutation, 44 patients with EGFR 21 exon mutation, 1 patient with EGFR 20 exon mutation, 1 patient with both EGFR 19 and 20 exon mutation and 1 patient with both EGFR 20 and 21 exon mutation.
The demographic and clinicopathological features of the patients with lung adenocarcinoma are presented in Table I. The median age (range) of the patients in the ROS1+, ALK+, EGFR+ and WT groups was 54.5 (27–60), 51.0 (23–79), 60.0 (34–83) and 62.0 (31–83) years, respectively. Individuals possessing ROS1 rearrangements were noted to be markedly younger in comparison with those with EGFR mutations (P=0.007) and patients who did not test positive for all three genes (P=0.003). Patients with ROS1 mutations were more likely to be female (P=0.006) in contrast to the WT group. Those who had no history of smoking were also more likely to have ROS1 mutations (P=0.005) in comparison with the WT group. The demographic features (age, sex and smoking history) of ROS1-rearranged patients were not different compared to those of ALK-rearranged patients. Patients across the four groups did not exhibit any notable variability in terms of carcinoembryonic antigen levels.
Table I.Clinical characteristics of the patients based on genetic alterations in lung adenocarcinomas. |
Comparison of the tD, tV and PSV between tumors with different gene statuses
Fig. 4 provides comparisons of the tD, tV and PSV across tumors with various genetic aberrations. The PSV [median (interquartile range)] in tumors with ROS1 rearrangements [87.9 (82.7–92.3) %] was markedly higher compared with those with EGFR mutations [70.4 (51.4–83.4)%; P<0.001] and those of the WT [63.0 (50.9–83.2)%; P<0.001]. However, the difference in PSV between the ROS1+ group and the ALK+ group [84.0 (70.3–90.0)%; P=0.251] was not significant. There was no difference in the median value of the tD and tV among the four groups.
CT images of four representative patients with different genetic status are presented in Fig. 5. The four tumors exhibited different PSV on CT.
The ROC curves for the predictive value of PSV for the gene rearrangements are provided in Fig. 6. The area under the ROC curve (AUC) of PSV to predict ROS1 rearrangement was 0.736 (95% CI, 0.637–0.835; P<0.001; Fig. 6A) at a cut-off value of 0.849. When the Youden index was maximal, the sensitivity was 0.750 and the specificity was 0.743. Given the similar PSV values in the ROS1+ group and the ALK+ group, a ROC curve to predict ROS1 or ALK rearrangement was drawn (Fig. 6B). The AUC was 0.702 (95% CI, 0.631–0.773; P<0.001) at a cut-off value of 0.805. When the Youden index was maximal, the sensitivity was 0.697 and the specificity was 0.702.
Impact of genetic aberrations on CT imaging
A total of two radiologists independently reviewed the CT imaging and recorded the interpretations. The differences in interpretation between the two radiologists were as follows: Multiple lesions (3/76; 3.9%), lobulated borders (18/236; 7.6%), fine spiculated margins (19/179; 10.6%), pleural retraction (8/145; 5.5%), bubble-like lucency or cavities (4/42; 9.5%), air bronchograms (7/62; 11.3%) and liquefaction necrosis (1/17; 5.9%). Disagreements were resolved by discussions to reduce the interobserver variability.
Table II summarises the final different features on CT imaging based on the various genetic aberrations. There were no differences in the frequency of multiple lesions, pleural retraction, fine spiculated margins, lobulated borders, bubble-like lucency or cavities, air bronchograms or liquefaction necrosis between tumors in the ROS1+ group and tumors in the ALK+, EGFR+ or WT groups.
Univariate and multivariate analyses of clinical radiological parameters to predict ROS1/ALK-rearrangement by logistic regression
Given the similar clinical radiological characteristics between ROS1+ tumors and ALK+ lncRNAs, and the same first line recommended targeted treatment, univariate and multivariate analyses of clinical radiological parameters were performed to predict ROS1/ALK-rearrangement. All clinical parameters, including age, sex and smoking status, the quantitative volumetric parameters, including the total nodule diameter and PSV and all the aberrations on CT imaging were assessed via univariate logistic regression analysis. The results presented in Table III demonstrated that age, smoking history, total nodule diameter, PSV and existence of lobulated border, fine spiculated margin and pleural retraction were different (P<0.1) between ROS1/ALK-rearranged and non-ROS1/ALK-rearranged patients. These different parameters were subjected to multivariate logistic regression analysis, the results of which are also presented in Table III. Younger age and higher PSV values were independent predictors of ROS1/ALK rearrangements in the multivariate analysis. The correlation analysis between PSV and age suggested that the two factors were not correlated (Fig. S1). The ROC curve of the predictive model combined with age and PSV is presented in Fig. 6C, with an AUC of 0.785.
Table III.Univariate and multivariate analyses of clinical-radiological parameters to predict ROS1/ALK rearrangement. |
Discussion
In the present study, the clinical-radiological features of lung adenocarcinoma with certain genetic alterations were investigated. As compared with the WT group, the group of patients with ROS1 aberrations had a younger age, higher proportion of females and non-smokers and had a higher PSV. In the ROS1+ group, the PSV was significantly higher than that in the EGFR+ group. However, the clinical-radiological features of the ROS1+ group and ALK+ group were similar.
The clinical characteristics of patients with ROS1 rearrangement have been discussed in several previous studies (15-17,24-27). The age of ROS1-rearranged positive and non-ROS1-rearranged patients did not significantly differ in these previous reports (15,16,24). However, the analysis of the present cohort revealed that in the ROS1+ group, the mean age was lower compared with that in the EGFR+ and WT groups, a result consistent with those of Bergethon et al (25) and Chen et al (26). Female sex appears to be a clinical feature associated with an increased prevalence of ROS1 fusion. Most studies reported that ROS1 fusion was more frequently encountered in female patients compared with that in their male counterparts (24,27,28). Numerous studies have also confirmed an association of female sex with ALK rearrangement and EGFR mutation (11–13). The present study demonstrated an association between female sex and ROS1 fusion, with the proportion of female patients in the ROS1+ group being larger than that in the WT group (71.4% vs. 35.7%, respectively). ROS1 fusions were observed in smokers and never smokers, but a number of studies have demonstrated an association between this genetic aberration and light or never smokers (24,25). However, other studies have revealed no association between smoking status and ROS1 fusion (15,26,29). Most of the ROS1-rearranged individuals in the present study were never smokers (23/28; 82.1%), with the number of never smokers being markedly higher than that in the WT group (58/112; 51.8%).
Fukui et al (12) first reported solid radiological features in lung adenocarcinoma with ALK rearrangement. The mean tumor shadow disappearance rate (TDR) in their ALK-rearranged group was markedly less than that in non- ALK-rearranged groups (P=0.0006) (12). In their and other previous studies, the TDR was defined as the ratio of the tumor area of the mediastinal window to that of the lung window (12,22,30). TDR provides a limited representation of the proportion of the GGO area, as it is calculated from the GGO proportion at the maximal section of the tumor (31,32) instead of the whole tumor. In the present study, data of the whole tumor nodule were first obtained to exactly calculate the PSV, which improved the accuracy of the calculation of the solid proportion. To the best of our knowledge, the present study also provided the first comparison of the volume of the solid component among the four primary genetic aberrations of lung adenocarcinomas.
The high PSV in ROS1 rearrangement tumors was consistent with that of ALK rearrangement tumors to a certain extent. It may be hypothesized that the similar radiological characteristics in these two groups reflect similar pathological features. A solid growth pattern and mucinous cribriform pattern were the two recognizable pathological findings in ALK-rearranged cancers (33,34). Yoshida et al (24) reported similar phenotypical features in tumors possessing either ALK and ROS1 genetic alterations, specifically, the presence of focal solid growth including signet-ring cells or cribriform architecture with abundant extracellular mucus in 53% of ROS1 rearrangement cases. Go et al (15) also frequently observed solid and micropapillary patterns in at least the focal areas of tumors in 78.5% (11 of 14) of ROS1-rearranged cases.
Given the similar clinical-radiological features between ROS1+ tumors and ALK+ tumors, multivariate analysis was also performed on the PSV and clinical features to predict ROS1 or ALK genetic changes in the present study. The results indicated a good predictive value of higher PSV and younger age for ROS1/ALK rearrangement in patients with lung adenocarcinoma. In addition to the excellent efficacy of crizotinib in ALK rearrangement lung adenocarcinomas, Shaw et al (8) demonstrated that ROS1-rearranged tumors were also sensitive to crizotinib treatment. Their study demonstrated that the median OS with crizotinib was 51.4 months (95% CI 29.3 months to not reached), the PFS was 19.3 months (95% CI 15.2–39.1 months) and the survival probability at 12, 24, 36 and 48 months was 79, 67, 53 and 51%, respectively. As both ROS1 rearrangement NSCLCs and ALK rearrangement NSCLCs benefit from treatment with crizotinib, it is important to distinguish ROS1/ALK rearrangement from EGFR mutation or WT NSCLCs. Furthermore, given the similar treatment and the clinical-imaging characteristics, it may be strongly recommended that a young patient with a high-PSV tumor should be tested preferentially for ROS1 and ALK rearrangements in the event of limited tissue samples or for financial sources.
The present study provides clinical data on a relatively large number of ROS1-rearranged patients and is the first demonstration of different imaging findings between ROS1-rearranged, ALK-rearranged, EGFR-mutated and WT lung adenocarcinomas. One limitation of the present study was that the CT images were obtained by two different systems, and most of the CT images were reconstructed with 5.0 mm and not 1.0 mm thickness. Another limitation was that the ALK-rearranged, EGFR-mutated and WT groups did not include all patients available but they were selected from them by a randomization procedure. This may have led to a slight selection bias for not including all the patients in the present study.
In conclusion, a solid pattern with a higher PSV on CT images was determined as the primary characteristic of tumors with ROS1-rearrangement in contrast to those with EGFR mutation and WT tumors. However, the solid CT characteristics between the ROS1+ group and ALK+ group were similar. PSV and age were independent predictors for ROS1/ALK rearrangement. Future prospective studies with unified methods and larger sample sizes are necessary to confirm the present results.
Supplementary Material
Supporting Data
Acknowledgements
Not applicable.
Funding
This study was supported by grants from the Key Research and Development Program of Zhejiang Province, China (grant no. 2019C03042 to JYiZ), the Zhejiang Provincial Natural Science Foundation (grant no. LGF19H160031 to JZ) and the National Natural Science Foundation of China (grant no. 81972179 to JYaZ). The funders had no role in the study design, participant recruitment, data collection, data analysis, data interpretation, manuscript preparation or the decision to submit the paper for publication.
Availability of data and materials
The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
Authors' contributions
JZ, JYaZ and JYiZ were responsible for the conception and design of the study. JL and JX did the quantitative volumetric assessments. KS, BW and WD did the genetic analysis. HC was responsible for data collection and analysis. All authors contributed significantly to data collection, data analysis, interpretation of the data and manuscript writing. All authors read and approved the final manuscript.
Ethics approval and consent to participate
The present study was approved by the Ethics Committee of the First Affiliated Hospital of Zhejiang University (Hangzhou, China; approval no. IIT20200137A) who waived the requirement for informed consent, as it was a retrospective study.
Patient consent for publication
Not applicable.
Competing interests
The authors declare that they have no competing interests.
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