Expression of immune check point gene TIM‑3 in patients newly diagnosed with acute myeloid leukemia: Significance and impact on outcome
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- Published online on: February 24, 2021 https://doi.org/10.3892/ol.2021.12587
- Article Number: 325
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Copyright: © Kamal et al. This is an open access article distributed under the terms of Creative Commons Attribution License.
Abstract
Introduction
Acute myeloid leukemia (AML) is an aggressive highly heterogeneous hematological malignancy associated with a poor prognosis and high mortality rate (1). According to the SEER cancer statistics of 2018, the age-adjusted incidence of AML was 4.3 per 100,000 annually in the United States while the mortality rate was 2.8 per 100,000 with an estimated median overall survival (OS) time of AML of 8.5 months and 2-year and 5-year OS rates were 32.0 and 24.0%, respectively (2). There is a high incidence of extramedullary disease (EMD) in AML at the initial diagnosis, during treatment and at relapse. Patients with AML and EMD have a worse prognosis than those without EMD (3). Conventional chemotherapy and hematopoietic stem cell transplantation remain the standard choice of care for patients with AML (4). However, resistance and poor tolerance to chemotherapy, treatment-related mortality and the high relapse rate create an urgent need to develop more effective and tolerable novel therapies for patients with AML, such as immune-based therapies (4,5).
Inhibitory checkpoints are part of the normal immune system that function to turn off an immune response. These molecules interrupt T-cell activation and proliferation, and decrease cytokine production, which is mandatory for the establishment of peripheral tolerance during normal immune responses (6). Research on the immune microenvironment of AML has revealed that leukemia cells manipulate the immune system by a dynamic process called immunoediting, through which it takes advantage of the normal inhibitory checkpoints by expressing the ligands of these checkpoint receptors, thus resulting in T-cell exhaustion, a process of gradual loss of T-cell function and downregulation of the immune system. This concept may potentially explain immune escape by both solid and hematological malignancies (6,7).
Exhausted T cells are characterized by increased expression of several inhibitory receptors, such as programmed cell death protein-1, T-cell immunoglobulin mucin domain 3 (TIM-3) and lymphocyte activation gene-3 (8). TIM-3 is a negative regulatory receptor expressed on CD4+ and CD8+ T cells, T-regulatory cells and dendritic cells; it plays a key role in inhibiting Th1 responses and the expression of cytokines, such as tumor necrosis factor and γ-interferon (8,9). There are four binding ligands that have been identified for TIM-3, including carcinoembryonic antigen cell adhesion molecule 1, high-mobility group protein B1, phosphatidylserine and galectin-9 (Gal-9) (9).
Several studies have demonstrated a close association between TIM-3 expression and tumor-associated immune suppression (10,11). TIM-3 and its ligand, Gal-9, are expressed on AML blast and leukemic stem cells (12). In addition, there is a reported increase in the percentage of TIM-3-expressing CD8+ T cells circulating in the blood of patients with AML compared with that in healthy individuals (13). However, further studies are required to confirm these results. The present study aimed to investigate TIM-3 expression in patients newly diagnosed with AML, as well as to determine its association with different prognostic variables and further investigate the impact of TIM-3 expression status on the clinical outcome.
Patients and methods
Patients
A total of 60 patients newly diagnosed with AML were recruited from the Department of Internal Medicine, Clinical Hematology and Bone Marrow Transplantation Unit, Ain-shams University Hospitals (Cairo, Egypt) between January 2018 and December 2018. All patients were treated and followed up for 12 months. A total of 15 healthy, age and sex matched individuals were enrolled to serve as controls. The patients included 24 men and 36 women, age range, 20–68 years, mean age of 53.4±12.9 years, while the healthy controls included 7 men and 8 women, with age range, 35–56 years, mean age of 46.9±6.3 years. The diagnosis was made according to the criteria of the French-American-British (FAB) classification and World Health Organization (14). The diagnosis was based on the morphological findings from Wright-Giemsa-stained smears of bone marrow aspirates, combined with immunophenotyping analyses of leukemic cells using diagnostic kits [CD34, CD13, CD33, myeloperoxidase, human leukocyte antigen-DR isotype (HLA-DR) HLA-DR, CD117, CD2 and CD19; Beckman Coulter, Inc.] (15) and cytogenetic studies by fluorescence in situ hybridization (FISH) using a locus-specific identifier DNA probe (fluorophore-labeled; Abbott Molecular). Dual-color FISH and visualization of hybridization signals by fluorescence microscopy were performed to detect the presence of recurrent cytogenetic abnormalities, as previously described by Fröhling et al (16).
A total of three cytogenetic risk groups were distinguished in AML, and patients with t(15;17), t(8;21) and inv(16) were assigned to the ‘favorable risk’ group, while patients with (3q), del(5q), −5/−7 or complex karyotype were assigned to the ‘poor risk’ group. The remaining patients, including normal karyotype, were assigned to the ‘intermediate risk’ group, and patients with intermediate or poor risk cytogenetics had an unfavorable prognosis (17).
The present study was approved by the Ethical Committee of Research, Faculty of Medicine, Ain Shams University, and performed in accordance with the Declaration of Helsinki. Written informed consent was provided by all participants prior to the study start. The inclusion criteria for the patients were: i) Age >18 years; and ii) newly diagnosed AML and fit to receive chemotherapy. The exclusion criteria for the patients were: i) Secondary AML; ii) relapsed AML; and iii) unfit to receive chemotherapy. The included patients provided a detailed history, subjected to a clinical examination, and had other data extracted and recorded from the patient files. All patients received induction standard chemotherapy in accordance with NCCN 2019 guidelines for AML (PETHEMA protocol for APL M3 and 3+7 protocol for other types of AML) (17). By the end of the first induction, all surviving patients were assessed regarding their responsiveness to chemotherapy. Assessment included a full blood work up, as well as a bone marrow (BM) examination. Patients were classified into responders, who attained complete remission (CR), and non-responders, who were refractory to chemotherapy. CR was defined as an absolute neutrophilic count >1,000/µl, a platelet count ≥100,000/µl and <5% BM blasts in a normocellular marrow, with no evidence of EMD. Patients who had achieved CR following induction chemotherapy were subjected to consolidation with either allogeneic stem cell transplantation, if they had poor risk cytogenetics and a matched sibling donor, or in cases where donors were unavailable and/or patients had a good risk from the start, high-dose chemotherapy (consolidation phase of PETHEMA protocol for APL M3 and high-dose cytosine arabinoside for other types of AML) (18). Overall survival time was defined as the time from the date of diagnosis until mortality. Patients still alive were censored at the end of the 12 months as only 1-year survival was assessed in the current study.
Reverse transcription-quantitative (RT-q)PCR
Peripheral blood samples were withdrawn from controls and from patients with AML prior to treatment, and contained in vacutainer tubes containing Na2 EDTA to determine the complete blood count and for total RNA purification from human whole blood. Total RNA was extracted using extraction buffer (present in the kit) and purified from human whole blood using the QIAamp RNA blood mini kit (Qiagen GmbH), according to the manufacturer's protocol. Total RNA was reverse transcribed into cDNA using the High Capacity cDNA Reverse Transcription kit (Applied Biosystems; Thermo Fisher Scientific, Inc.), according to the manufacturer's protocol, and stored at −20°C until subsequent experimentation. qPCR was subsequently performed using the Rotor-Gene Q® Real-Time PCR cycler (Qiagen GmbH), with standard thermocycling conditions according to the Thermo Fisher Scientific Inc. protocol (95°C for 10 min, followed by 40 cycles of 95°C for 15 sec and 60°C for 1 min) and the Taqman assay specific for TIM-3 (catalog no. Hs00958618_m1; Thermo Fisher Scientific, Inc.). Relative expression levels were normalized to the internal reference gene GAPDH (catalog no. Hs02786624_g1). The primer sequences used were as follows: TIM-3 forward, 5′-CCAAATCCCAGGCATAAT-3′ and reverse, 5′-AAGCGACAACCCAAAGGT-3′, and GAPDH forward, 5′-GTCTCCTCTGACTTCAACAGCG-3′ and reverse, 5′-ACCACCCTGTTGCTGTAGCCAA-3′. The expression levels in unknown samples were normalized and analyzed by the 2−∆∆Cq method where ∆∆Cq=(Cqtarget gene-CqGAPDH) sample-(Cq target gene-CqGAPDH) calibrator (19).
Statistical analysis
Statistical analysis was performed using SPSS 23.0 software (IBM Corp.) and MedCalc 18.2.1 software (MedCalc Software bvba). Data are presented as the mean ± standard deviation. Unpaired Student's t-test was used to compare differences between two groups. Skewed numerical data are presented as the median and interquartile range, and the Mann-Whitney U test was used to compare differences between two groups, while the Kruskal Wallis test followed by the Conover post hoc test, Bonferrroni-adjusted (critical P-value <0.005), was used to compare differences between multiple groups. Categorical variables are presented as number and percentage, and differences were compared using the Fisher's exact test. Correlations were assessed using the Spearman's rank correlation coefficient. Receiver operating characteristic (ROC) curve analysis was performed to determine the diagnostic value of TIM-3. Area under the curve (AUC) values between 0.50–0.69 represent diagnostic tests with low accuracy, while values between 0.7–0.9 represent moderate accuracy and values >0.9 represent high accuracy (20). The Kaplan-Meier method and log-rank test were performed to determine the prognostic value of TIM-3. P<0.05 was considered to indicate a statistically significant difference.
Results
Clinical characteristics of patients with AML
Demographic data and baseline characteristics of the 60 patients with AML are presented in Table I. Of the 60 patients, 8 (13.3%) presented with EMD, including 6 men (75.0%) and 2 women (25.0%), and the extramedullary sites of the disease were the skin (leukemia cutis) in 3 cases and the central nervous system (CNS) in 5 cases (3 cases with only spinal fluid involvement and 2 cases with isolated CNS chloroma). The majority of patients with EMD (5 cases) were classified as the M4 subtype, while 2 cases were the M1 subtype and 1 case was the M0 subtype. All cases exhibited unfavourable cytogenetics.
TIM-3 expression in patients with AML and healthy individuals
TIM-3 expression was significantly upregulated in patients with AML compared with that in the healthy individuals, with median relative expression levels of 2.99 (range, 1.45–5.65) and 1.07 (0.84–1.12), respectively (P<0.001; Fig. 1). In addition, ROC curve analysis was performed to determine the optimum cut-off value of TIM-3 expression for discrimination between patients with AML and healthy individuals. The results demonstrated a moderate diagnostic value, with an AUC value of 0.840 and optimum cut-off level >1.197. The diagnostic sensitivity and specificity were 81.7 and 100.0%, respectively (Fig. 2).
TIM-3 expression and EMD in patients with AML
Patients with EMD exhibited significantly lower median TIM-3 expression levels than those without EMD, and their median expression levels were 1.3 and 3.1, respectively (P<0.001; Fig. 3). ROC curve analysis was performed to determine the optimum cut-off value of TIM-3 expression for the prediction of AML cases with EMD (AUC, 0.853; optimum cut-off level, ≤2.2). The diagnostic sensitivity and specificity were 100.0 and 69.2%, respectively (Fig. 4).
Association between TIM-3 expression and the clinicopathological characteristics of patients with AML
TIM-3 expression was significantly associated with hemoglobin (r=−0.450; P<0.001), peripheral blood blast (r=0.324; P=0.01) and BM blasts (r=0.300; P=0.02) counts in patients with AML. However, no statistically significant associations were observed between TIM-3 expression and age, white blood cell and platelet counts (Table II).
In addition, TIM-3 expression significantly varied amongst the FAB subtypes (P<0.001), whereby expression was significantly higher in patients with the M1 subtype (median, 34.2; IQR, 34.00–34.59) and M4 subtype (median, 3; IQR, 2.94–6.36), compared with the other subtypes (P<0.005; Fig. 5).
TIM-3 expression was significantly upregulated in patients with CD34+, CD13+ and HLA-DR+ BM blasts compared with those with CD34−, CD13− and HLA-DR− BM blasts (P=0.031, P=0.010 and P=0.020, respectively; Fig. 6). Patients with unfavourable prognosis (intermediate and poor risk cytogenetics) exhibited almost comparable expression levels of TIM-3 to patients with favourable prognosis (favourable risk cytogenetics), with no statistically significant differences between the two groups (P=0.447; Table III).
TIM-3 expression and clinical outcomes in patients with AML
To assess the impact of TIM-3 expression on the clinical outcomes of patients with AML, regarding their responsiveness to induction chemotherapy and overall 1-year survival during the first year, patients were assigned to two groups, the low TIM-3 expression group (24 patients) and the high TIM-3 expression group (36 patients), based on their median TIM-3 expression level. By the end of the induction cycle of treatment, on Day 28 (D28), the study cohorts were compared regarding their TIM-3 expression levels and treatment outcomes. A total of 12 patients (20%) in the high TIM-3 expression group died due to pulmonary fungal infection, septicemia and bleeding complications. However, high TIM-3 expression was not significantly associated with a higher mortality risk by the end of the induction chemotherapy (P<0.09). The 48 survivors (80%) underwent re-evaluation of their disease response to chemotherapy, and were further categorized into 36 responders (75%), including 12 patients (33%) with high TIM-3 expression and 24 patients (66%) with low TIM-3 expression. Conversely, the 12 non-responders (20%) with refractory disease were all categorized into the high TIM-3 expression group. Thus, all cases of AML with low TIM-3 expression were responders to induction chemotherapy, and of the patients with high TIM-3 expression, only 12 of them were responders to induction chemotherapy (Table IV). Comparison of responders vs. non-responders in terms of TIM-3 expression demonstrated that the responders had significantly lower TIM-3 expression levels compared with the non-responders (P=0.004; Table IV). Patients were followed up for 12 months, and of the 60 patients recruited, only 12 patients were alive at the end of the follow-up period, 8 of who had low TIM-3 expression and 4 with high TIM-3 expression. Kaplan-Meier survival analysis demonstrated that patients with high TIM-3 expression exhibited a significantly lower overall 1-year survival rate compared with those with low TIM-3 expression (P=0.001; Fig. 7).
Discussion
AML is the most common type of acute leukemia in adults (21). Despite recent advancements in the therapeutic landscape of AML, patient prognosis remains poor (22). Thus, an improved understanding of the immune checkpoints and immune response to AML is imperative for appropriate development and application of novel immunotherapies (23). TIM-3 is a key immune checkpoint in tumor immune suppression; however, its role in AML remains unclear (24). Thus, the present study investigated TIM-3 expression in patients with AML and assessed its clinical significance as a potential prognostic tool for adult AML. The results demonstrated that TIM-3 expression was significantly upregulated in patients with AML compared with that in the control group. This result is consistent with previous findings, which have demonstrated that TIM-3 expression is upregulated in bone marrow samples of patients with AML via RT-qPCR analysis (25) and flow cytometric analysis of peripheral blood T cells or bone marrow blasts (13,26). The results of the present study also demonstrated that TIM-3 expression exhibited moderate diagnostic value in the AML cohort. Research on the tumor microenvironment suggest that aberrant overexpression of TIM-3 in patients with AML may be attributed to the upregulated TIM-3 expression on the T-cell surface, mediating T-cell exhaustion in response to the continuous stimulation of malignant cell antigens, thus resulting in a weakened tumor immune response (27). In addition, high TIM-3 expression on AML blasts may also explain its high level in studied AML cohorts (28). Focusing on the association between TIM-3 expression and patient characteristics, the present study demonstrated a positive correlation between TIM-3 expression and bone marrow and peripheral blast count. This result was explained in the study by Silva et al (29), which analyzed the total expression and surface presence of the TIM-3 receptor in primary human AML blasts and healthy primary human leukocytes isolated from human blood. It was reported that primary AML cells generate more TIM-3 protein compared with healthy leukocytes, including cell surface protein expression. In addition, only 30% of TIM-3 molecules are externalized in primary healthy leukocytes, while almost all TIM-3 protein is present on the cell surface of primary AML cells, facilitating its ability to mediate ligand-induced activation of the mammalian target of rapamycin pathway (29).
The results of the present study demonstrated that TIM-3 expression was significantly upregulated in patients with the M1 subtype compared with that in patients with the other FAB subtypes. Consistently, Darwish et al (25) reported that TIM-3 expression is upregulated in M1 and M4 patient groups compared with the other FAB subtypes. However, another study demonstrated that TIM-3 expression is upregulated in the M4 subtype compared with the other FAB subtypes (13).
The present study aimed to investigate the association between TIM-3 expression and different prognostic parameters in patients with AML. Cytogenetics analysis is one of the most powerful independent prognostic factors in AML; however, comparisons between TIM-3 expression in different cytogenetic risk categories in the present study failed to prove any association between cytogenetic risk groups and high TIM-3 expression. Conversely, Xu et al (26) confirmed a significant association between TIM-3 expression and inv(16), which is a favorable cytogenetic abnormality, while Li et al (13) reported that high TIM-3 expression on CD8+ T cells in patients with AML is significantly associated with unfavorable cytogenetic abnormalities. The present study detected significantly higher TIM-3 expression in patients with positive expression of surface antigens CD34, CD13 and HLA-DR, which are considered predictors of adverse outcome in AML (30,31). These results are consistent with those in the study by Xu et al (26), which detected significantly positive correlations between TIM-3 expression and CD34 and CD13 in patients with AML. Several studies have reported that patients with AML and EMD have a worse prognosis due to a poor response to chemotherapy and a high relapse rate (32). To the best of our knowledge, the present study was the first to investigate the association between TIM-3 expression and EMD in AML. Notably, the results demonstrated that TIM-3 expression was significantly downregulated in patients with EMD compared with that in those without EMD. In addition, TIM-3 expression exhibited moderate value in the prediction of AML cases with EMD. The AML cohort included 36 patients who exhibited high TIM-3 expression, while the remaining 24 patients had low TIM-3 expression. The impact of TIM-3 expression on the patient response to the induction chemotherapy protocol demonstrated that patients with low TIM-3 expression achieved a higher rate of CR compared with that of patients with high TIM-3 expression. Refractory cases exhibited significantly higher TIM-3 expression compared with the responders. These findings oppose those recorded in the study by Xu et al (26), which reported that patients with high TIM-3 expression achieved a significantly high CR rate due to the acceleration of leukemic cell apoptosis by ligand-dependent TIM-3 activation, which triggers tumor necrosis factors and induces growth factors. However, there is contradicting data to this explanation, reported in a study by Kikushige and Miyamoto (33), which demonstrated that Gal-9 produced by leukemic stem cells binds and stimulates TIM-3 expression on AML cells, including leukemia stem cells, thus supporting their survival and leukemia progression. Regarding the impact of TIM-3 expression on the overall 1-year survival of the patients assessed in the present study, the results demonstrated that patients with high TIM-3 expression had a significantly lower overall 1-year survival rate than compared with those with low TIM-3 expression. These results are consistent with those reported by Darwish et al (25), where it was demonstrated that patients with AML and low TIM-3 expression exhibit a longer overall survival time compared with those with high TIM-3 expression.
The present study is not without limitations. First, only 60 patients were included in the study cohort, and the cytogenetic and molecular profiles were not complete for all patients. Thus, further studies are required to confirm the expression of the immune checkpoint gene TIM-3 in a larger sample size, including full chromosomal and molecular studies. Secondly, the present study failed to investigate TIM-3 expression following chemotherapy, which would explore the correlation between the follow-up TIM-3 expression level and remission status.
In conclusion, the results of the present study demonstrated that TIM-3 expression was significantly upregulated in patients with AML. In addition, high TIM-3 expression was associated with a poor response to chemotherapy and a lower overall survival rate, suggesting that TIM-3 may act as a biomarker for a poor prognosis in AML. However, further studies are required to confirm the use of TIM-3 as a potential therapeutic target for AML.
Acknowledgements
Not applicable.
Funding
No funding was received.
Availability of data and materials
All data mentioned in this paper are available from the corresponding author and will be provided upon request.
Authors' contributions
NAN wrote the manuscript. AMK, SMR and NSE critically edited the manuscript. NAN, AMK, SMR and NSE helped to design the study, perform the research and analyze the data. NAN, SMR, NSE and AMK confirm the authenticity of all the raw data. All authors have read and approved the final manuscript.
Ethics approval and consent to participate
The study was approved by the Ethical Committee of Research, Faculty of Medicine, Ain Shams University (Cairo, Egypt) and was conducted in accordance with the Declaration of Helsinki. Consent was obtained from all individuals included in this study for their participation.
Patient consent for publication
Consent was obtained from all individuals included in this study to publish their scientific data in an aggregated anonymized manner.
Competing interests
The authors declare that they have no competing interests.
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