Radiosensitization of esophageal carcinoma cells by the silencing of BMI-1
- Authors:
- Published online on: April 13, 2016 https://doi.org/10.3892/or.2016.4744
- Pages: 3669-3678
Abstract
Introduction
Esophageal carcinoma is a common alimentary canal malignancy with high incidence. There are ~0.3104 million new malignancies worldwide each year. Despite extensive advancement in its diagnosis and treatment, recurrence of esophageal carcinoma remains the main cause of high mortality after treatment for these patients. Current treatments, including surgical intervention, radiotherapy (RT) and chemotherapy, are moderately effective in early-stage cases, but are less effective in more advanced cases (1). For example, RT is one of the most important methods for patients at every stage of esophageal carcinoma, however, patient prognosis remains unsatisfactory and unpredictable due to profound radioresistance. Thus, identification of key molecules or pathways specifically expressed in esophageal carcinoma that are essential for the growth of cancer cells may provide novel therapeutic targets and ultimately lead to improved survival. Research over the past years clearly implicates multiple genetic alterations in the development and progression of esophageal carcinoma (2), including those that have important functions in cell adhesion, signal transduction, cell differentiation, metastasis, DNA damage and repair (3).
B-cell-specific Moloney murine leukemia virus integration site-1 (BMI-1), a member of the polycomb group of transcriptional repressors, has been detected in a variety of human carcinoma specimens, from pre-cancerous to advanced stages. In particular, BMI-1 is overexpressed in a number of malignancies (4,5). Recently, it has been reported that BMI-1 is also overexpressed in alimentary canal cancers, particularly in esophageal carcinoma, which suggests that BMI-1 may confer radioresistance to esophageal carcinoma (6). Gene chip analysis also showed that BMI-l predicts cancer metastasis (7), promotes cancer cell proliferation and invasion, causes resistance to apoptosis and enhances transfer capabilities (8). Moreover, as an active heterodimer E3 ligase, BMI-1 may induce the ubiquitination and phosphorylation of H2AX, which is thought to be a critical sensor that can initiate DNA damage response (DDR) (9–11). Our research has also shown that H2AX is associated with the radiosensitization of esophageal cancer cells (12). However, how the function of BMI-1 in radiosensitivity is regulated remains a fundamental question that needs to be answered to elucidate the essential mechanisms controlling DDR.
To identify the regulatory function of BMI-1 in DDR, we conducted proteomic analysis to systematically identify BMI-1 interacting proteins and the related mechanisms. However, to the best of our knowledge, the mechanisms by which BMI-1 promotes the proliferation of esophageal carcinoma cells after RT have not been reported, to date. Given the important role of BMI-1 in ionizing radiation-induced DDR, we hypothesized that silencing of BMI-1 may cause DNA damage pathway defects and thus increase radiosensitivity. In the present study, we verificated this hypothesis in vitro through two different cell lines and explored the mechanisms through which BMI-1 induces tumor progression.
Materials and methods
Cell lines and cell culture
The human esophageal squamous cell carcinoma cell lines ECA109 and TE13 were cultured in RPMI-1640 medium supplemented with 10% fetal bovine serum (FBS) at 37°C in 5% CO2. The shRNA plasmid of BMI-1 was purchased from the GeneChem Co. ECA109 and TE13 cells were plated in 12-well plates at a density of 300 cells/well in triplicates, and plasmid multiplicity of infection (MOI) was 10. The cells were cultured in RPMI-1640 + 10% FBS with 5 µg/ml Polybrene for 12 h. Cells were collected 12 h after transduction with the plasmid and were selected in puromycin for stable clones. Subsequently, the cells were used for irradiation as indicated.
X-ray irradiation
Irradiation was performed at room temperature with a 6-MV Siemens linear accelerator (Siemens, Concord, CA, USA) at a dose rate of 2 Gy/min. After irradiation, the cells were recovered in an incubator for the indicated time until harvesting.
shRNA transfection
For the shRNA analyses, human BMI-1 small interfering RNA (shRNA) with the nucleotide sequence: 5′-GCUUAUCCAUUGAAUUCUUUGACCA-3′ (sense) and 5′-UGGUCAAAGAAUUCAAUGGAUAAGC-3′ (antisense), corresponding to part of the BMI-1 mRNA; and the negative control (NC) scrambled shRNA (NC-shRNA sense, 5′-UUCUCCGAACGUGUCACGUTT-3′ and antisense, 5′-ACGUGACAGGUUCGGAGAATT-3′) were designed and purchased from Invitrogen Corp. (Carlsbad, CA, USA). All of the shRNA sequences were subjected to the Basic Local Alignment Search Tool (BLAST) to confirm the absence of homology to any additional known coding sequences in the human genome. Cells were transfected using Lipofectamine RNAiMAX (Invitrogen) according to the manufacturer's protocol. Briefly, one day prior to transfection, ECA109 and TE13 cells (5×105/well) were cultured in 6-well tissue culture plates until they reached 50% confluency, and then the cells were transiently transfected with either BMI-1-shRNA or NC-shRNA (100 nM).
Quantitative real-time reverse transcription-polymerase chain reaction (qRT-PCR)
Total RNAs were extracted using TRIzol reagent. Real-time PCR was then performed using Platinum SYBR-Green qPCR SuperMix-UDG (Invitrogen) according to the manufacturer's protocol. Briefly, after the reverse transcription reaction at 42°C for 60 min and 70°C for 5 min, cDNAs were synthesized using the ReverAid First Strand cDNA Synthesis kit (Thermo, Waltham, MA, USA), and then initially denatured at 94°C for 30 sec, followed by 40 cycles of the repeated procedure as follows: denaturation at 94°C for 5 sec, annealing at 56°C for 15 sec and extension at 72°C for 10 sec. As a control, the levels of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) expression were also analyzed. Incorporation of the SYBR-Green dye into PCR products was monitored in real-time with LightCycler real-time PCR detection system (Roche Applied Science, Indianapolis, IN, USA), thereby allowing determination of the threshold cycle (Ct) at which exponential amplification of products begins. Independent experiments were repeated 3 times for each sample, and the relative expression levels of genes were analyzed using the 2−ΔΔCt method (13).
Western blot analysis
The cellular total protein was solubilized in RIPA lysis buffer (1% Triton X-100, 150 mM NaCl, 10 mM Tris-HCl, pH 7.4, 1 mM EDTA, 1 mM EGTA, pH 8.0, 0.2 mM Na3VO4, 0.2 mM phenylmethylsulfonyl fluoride and 0.5% NP-40). The protein amount was evaluated using BCA assays and separated on 10% SDS-PAGE gel, and electrotransferred to polyvinylidene fluoride (PVDF) membranes (Pierce, Rockford, IL, USA). The membranes were incubated overnight at 4°C with the indicated antibodies. The specific antibodies were rabbit BMI-1 (1:10,000), anti-p16 (1:50,00), anti-rH2AX (1:10,000), rabbit bcl-2 (1:1,000), anti-bax (1:500) and rabbit β-actin antibodies (1:10,000) (all from Abcam, Cambridge, MA, USA). After washing for 3×5 min with TBS-T, the membranes were incubated with secondary anti-rabbit IgG for 1 h at room temperature away from light. The membranes were scanned for the relative value of protein expression in gray scale by Image-Pro Plus software 6.0 (Media Cybernetics, Sliver Spring, MD, USA). The levels of the protein were calculated as the ratio of the intensity of protein to that of β-actin. Experiments were carried out in triplicate wells/time period and repeated 3 times.
Cell proliferation assay
The cells (2×103/well) were cultured in 96-well tissue culture plates until they reached 50% confluency, and then transfected with a final concentration of 100 nM. After transfection for 24 h, viability of the cells was determined at 24, 48 and 72 h after irradiation using the CellTiter 96 AQueous One Solution cell proliferation assay (MTS) (Dojindo Molecular Technologies, Gaithersburg, MD, USA). Briefly, the cells were collected and incubated in medium containing 5 mg/ml MTS reagent (Promega Corporation, Madison, WI, USA) at 37°C for 2 h. The absorbance at 492 nm was measured by an enzyme-linked immunosorbent assay (ELISA) plate reader. This experiment was repeated 3 times.
Transwell assay
Cell invasion was estimated using 24-well Transwell chambers with polycarbonate filters of 8-µm pore size (Costar), and the chambers were precoated with extracellular matrix gel obtained from Corning (Corning, NY, USA). Twenty-four hours after transfection and 1 h after irradiation, an aliquot of 5×104 cells was placed in the upper chamber with 0.2 ml serum-free medium, whereas the lower chamber (24-well plate) was loaded with 0.5 ml of medium containing 10% FBS. The chambers were incubated in a humid atmosphere of 5% CO2 at 37°C for 4.5 h in the invasion assay. After incubation, the cells on the upper surface of each filter were wiped off with a cotton swab. The cells on the lower surface of the filter were fixed with 4% formaldehyde, stained with crystal violet for 8 min, and then washed with water. For each filter, the number of migrated or invaded cells in five fields (magnification, ×200) was observed and counted.
Co-immunoprecipitation (Co-IP) assay
Cell lysates were first pre-cleared with 25 ml of protein A-agarose (Santa Cruz Biotechnology, Santa Cruz, CA, USA). The supernatants were immunoprecipitated with 2 mg of anti-rH2AX (1:100), anti-H2AK119ub (1:100), anti-BMI-1 (1:100) (all from Abcam) antibody for 2 h at 4°C, followed by incubation with protein A-agarose overnight at 4°C. Protein A-agarose antigen-antibody complexes were pelleted by centrifugation at 12,000 × g for 60 sec at 4°C. The pellets were washed five times with 1 ml IPH buffer, for 20 min each time at 4°C. Bound proteins were resolved by SDS-PAGE, followed by western blotting with antibodies against rH2AX, H2AK119ub and BMI-1.
Analysis of cell cycle distribution and apoptosis
Both cell cycle distribution and spontaneous apoptosis events were detected using a FACsCalibur II sorter and CellQuest FACS system (BD Biosciences, San Jose, CA, USA). To analyze cell cycle distribution, the cells were transfected using shRNA for 24 h and stimulated with irradiation for 24 h before being harvested. Cells were fixed with 70% ethanol at 4°C overnight, washed twice with phosphate-buffered saline (PBS) and resuspended in staining solution (50 µg/ml propidium iodide, 1 mg/ml RNase A, 0.1% Triton X-100 in PBS) for 30 min at 37°C in the dark. To detect the extent of apoptosis under stress conditions, cells were transfected using shRNA for 24 h before irradiation and stained with fluorescein isothiocyanate (FITC)-conjugated Annexin V and 7-amino-actinomycin D (7-AAD) using the Annexin V-FITC apoptosis detection kit (BD Pharmingen) according to the manufacturer's protocol.
Colony formation assay
Cell survival curves were generated by a standard colony formation assay with minor modifications (14). Precooled tumor cells were irradiated by graded single doses (0–8 Gy) in control, NC and BMI-1 shRNA groups, seeded in Petri dishes, and cultivated in RPMI-1640 supplemented with 10% FBS. The experiments were repeated at least twice. Two weeks later, the cells were fixed and stained with crystal violet (0.6%). Colonies exceeding 50 cells were scored as survivors.
Statistical analysis
Statistical analysis was conducted with the SPSS software package version 13.0 (SPSS, Inc., Chicago, IL, USA). All data are presented as the mean ± standard deviation (SD), and analyzed using ANOVA with SPSS 13.0. For all tests, a p-value of <0.05 and 0.01 was considered to be statistically significant and is indicated by asterisks in the figures. All p-values given are the results of two-sided tests. Data were obtained from at least three independent experiments with a similar pattern.
Results
shRNAs targeting the BMI-1 gene and protein downregulate BMI-1 expression in the ECA109 and TE13 cells following transfection
To address the functional importance of the BMI-1 gene, we employed shRNA to deplete its expression in ECA109 and TE13 cells, both of which were treated with NC-shRNA or shRNA targeting the BMI-1 gene. After transfection for 24 h, the expression of BMI-1 in cells was examined by real-time quantitative reverse transcription-polymerase chain reaction (qRT-PCR) and western blot analysis. The qRT-PCR analysis confirmed that the levels of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) were unaffected by transfection of BMI-1-shRNA or NC-shRNA. As shown in Fig. 1A, qRT-PCR showed that the expression of BMI-1 in the BMI-1-shRNA group was significantly lower than the levels in the control and NC-shRNA group after transfection for 24 h (p<0.01). Similar results were observed in the western blot analysis (Fig. 1B). These data indicated that BMI-1-specific shRNA effectively and obviously suppressed the expression of BMI-1 in the ECA109 and TE13 cells.
Specific knockdown of BMI-1 expression by shRNA inhibits the growth and improves the radiosensitivity of ECA109 and TE13 cells after IR in vitro
To evaluate the effect of BMI-1 on ECA109 and TE13 cell proliferation, cells in the 3 groups were harvested at 24 h after transfection with shRNA of BMI-1 and at 24, 48 and 72 h after irradiation. MTS assay results showed that the proliferation rates of the ECA109 and TE13 cells were not significantly different in the 3 groups at each time point without irradiation (Fig. 2A). However, the proliferation levels of the ECA109 and TE13 cells were significantly lower in the BMI-1 shRNA group when compared with the proliferation levels noted in the control and NC-shRNA groups after IR (Fig. 2B). Moreover, the proliferation levels in each group were obviously higher at 48 and 72 h after IR than these levels in the corresponding unirradiated groups. In addition, we also detected the radiation sensitivity in the different groups after exposure to IR and found that there was no significant difference between the control and NC groups. However, cells in the BMI-1 shRNA group had higher sensitivity than that noted in the other groups (Fig. 2C). These results suggest that downregulation of BMI-1 after irradiation significantly inhibited the proliferation of the ECA109 and TE13 cells and increased radiation sensitivity.
BMI-1 shRNA inhibits the invasive ability of the ECA109 and TE13 cells
Transwell assay revealed that the ECA109 and TE13 cells transfected with BMI-1 shRNA had a much lower invasive activity than that noted in the control and NC group cells (p<0.05) before and after irradiation (Fig. 3A, ECA109; and B, TE13). This suggests that suppression of BMI-1 had an inhibitory effect on the invasion of cells. There was no significant difference between the control and NC group.
BMI-1 interacts with the ubiquitination and phosphorylation of H2AX in ECA109 and TE13 cells in a DNA damage-induced manner
The specificity of this interaction was confirmed by Co-IP of H2AK119ub, r-H2AX and BMI-1. Notably, the interactions between BMI-1 and H2AK119ub or r-H2AX were obviously enhanced in the ECA109 and TE13 cells after IR (Fig. 4B), while there was no significant interaction without irradiation (Fig. 4A). This modification was induced by DNA damage as we observed that the ubiquitination and phosphorylation of H2AX were increased upon IR, indicating that BMI-1 may play an important role in DNA damage repair through inducing the ubiquitination and phosphorylation of H2AX. In addition, the downregulation of r-H2AX and upregulation of P16 were detected in the BMI-1 shRNA group after knockdown of BMI-1 expression (Fig. 4C).
Mechanisms of radiosensitization of the silencing of BMI-1
In order to further explore the mechanisms involved in the promotion of radiosensitization of esophageal cancer cells by silencing of BMI-1, flow cytometry was performed and demonstrated that irradiation obviously induced cell cycle arrest at the G2/M stage after irradiation for 24 h both in the ECA109 and TE13 cells in vitro. However, silencing of BMI-1 by shRNA obviously decreased the cell cycle arrest after irradiation (Fig. 5B), which allowed much time for repair of damaged tumor cells. Cancer cell repair may decrease the killing effect of RT, which induces radioresistance. With no irradiation, there was no significant difference among the BMI-1 shRNA, control and NC groups (Fig. 5A). Our results showed that knockdown of BMI-1 expression in esophageal cancer ECA109 and TE13 cells by RNA interference technology after exposure to irradiation decreased the G2/M phase arrest in cells to a certain degree, reducing the opportunity of tumor cells to repair thereby enhancing radiosensitivity.
In addition, the apoptosis rate was not obviously different among the control, NC and BMI-1 shRNA groups, in vitro without irradiation (Fig. 6A). However, the apoptosis rate in the BMI-1 shRNA group was significantly higher than that of the other two groups after RT both in the ECA109 and TE13 cells (Fig. 6B and C). In addition, the apoptosis levels in the different groups were increased after irradiation. In order to further explore the mechanism, we observed the expression levels of bcl-2 and bax after (Fig. 7B) and before irradiation (Fig. 7A). Significant downregulation of bcl-2 (Fig. 7C) and upregulation of bax (Fig. 7D) were observed in the BMI-1-shRNA group after treatment with irradiation. Notably, there were no significant changes among the 3 groups without irradiation. Thus, BMI-1 has the ability to regulate the cell cycle, induce apoptosis and thus promote radiosensitivity after IR.
Discussion
Esophageal carcinoma is one of the most frequent malignant tumors, and is associated with the highest morbidity and mortality worldwide. For example, the incidence of esophageal carcinoma is as high as 26.3/100,000 in the US, which is higher than that in Asia. Radiotherapy (RT) is one of the most important treatment methods for esophageal carcinoma, but the 5-year survival rate is only 10 to 15%, accompanied by a high recurrence rate at ~60 to 80%. Despite improvement in the local control rate after extensive application of new techniques in RT, local failure is still the main cause of death. Moreover, the molecular mechanisms behind the development and progression of esophageal carcinoma after RT are unknown.
BMI-1, one of the core components in polycomb repressive complex 1, may play an important role in the immortalization of normal epithelial cells and early malignant transformation, as well as in the maintenance of the self-renewal of stem cells and carcinogenesis in esophageal carcinoma. In addition to their role in development, as one of the polycomb group proteins, BMI-1 has been reported to be overexpressed in a variety of human cancers, such as malignant lymphomas and various solid tumors (15). In the present study, we designed and constructed an shRNA recombinant expression vector targeting BMI-1 and detected its expression at both the protein and mRNA levels after transfection for 24 h. The findings demonstrated that BMI-1 expression at both the protein and gene levels was obviously lower in the BMI-1-shRNA group than those noted in the control and the NC groups, while there was no significant difference between the control and the NC group, indicating that the shRNA targeting of BMI-1 decreased the BMI-1 expression, and may be a potential therapeutic strategy for the gene therapy of esophageal carcinoma.
In the present study, we also investigated the effects on proliferation, invasion and radiosensitivity of esophageal carcinoma cells by BMI-1 shRNA following irradiation. The suppression of BMI-1 expression in the ECA109 and TE13 cells significantly inhibited cell proliferation and improved radiosensitivity after the cells were treated with shRNA and irradiation at different times. The invasive ability of the cancer cells in the BMI-1 shRNA group was also obviously suppressed after irradiation or not. Previous studies have reported that the downregulation of BMI-1 by adenovirus-mediated delivery of BMI-1 shRNA reduced the proliferation and invasion of cancer cells and decreased the radioresistance (16,17). Notably, there were no obvious differences among the control group, NC and BMI-1-shRNA group without irradiation either in proliferation or in radiosensitivity, indicating that RT combined with shRNA effectively inhibits the proliferation of tumor cells and enhances radiosensitization.
It was reported that BMI-1 is related to the ubiquitination and phosphorylation of H2AX (18). Recent studies identified that BMI-1 possesses E3 ligase activity for H2AX monoubiquitination and interacts with H2AX in a DNA damage-induced manner (19). In accordance with previous research, our results found that interaction between BMI-1 and ub-H2AX or r-H2AX was obviously enhanced in esophageal carcinoma after exposure to IR, while there was no significant interaction without irradiation, indicating a vital role of BMI-1 in DDR and its potential mechanism. Our pre-trial confirmed that it could increase radiation sensitivity through knockdown of H2AX in esophageal cancer and cell cycle arrest at the G0/G1 phase (12). In the present study, we found that silencing of the BMI-1 gene by shRNA significantly decreased the phosphorylation of H2AX, followed by upregulation of p16, which is able to inactivate CDK by directly binding to CDK4 and CDK6, leading to cell cycle arrest (20). These data indicated that BMI-1 may play an important role in regulating the cell cycle through interaction with H2AX.
Cellular responses to DNA damage include cell cycle arrest and apoptosis. The highest expression of BMI-1 is observed in the G2/M phase (21,22). Our data revealed that inhibition of the expression of BMI-1 by shRNA in ECA109 and TE13 cells significantly induced spontaneous cell apoptosis and eliminated cell cycle arrest at the G2/M phase of the cell cycle after RT. However, given no ionizing radiation, there was no statistically significant difference among the control, NC and BMI-1 shRNA group. These results are in accordance with previous studies on esophageal carcinoma (23) and cervical carcinoma cells (24). Accordingly, this method of suppressing BMI-1 expression which leads to cell growth inhibition and the induction of apoptosis, in turn reduces the proliferation of esophageal carcinoma cells, indicating that it may have a significant therapeutic effect on esophageal carcinoma (25,26). In the present study, our data showed that the apoptosis rate of cells was higher in the BMI-1 shRNA group than that noted in the control and NC group after exposure to irradiation, while there was no statistically significant difference among the 3 groups without RT. Meanwhile, our results further indicated that the promotive effect of BMI-1 shRNA on the apoptosis in ECA109 and TE13 cells after treatment with irradiation was accompanied by upregulated expression of bcl-2 and downregulation of bax, which are associated with cell apoptosis after DNA damage. These results are in accordance with previous studies, which showed that BMI-1 increased cell apoptosis through regulation of apoptosis-related proteins (27–29), and further enhanced radiosensitivity.
In summary, our data explored the important role of BMI-1 in the growth and invasion of esophageal carcinoma by shRNA silencing of BMI-1 expression after IR or not. In addition, downregulation of BMI-1 decreased bcl-2 expression, enhanced bax expression and eliminated IR-induced G2/M arrest by inhibition of BMI-1 expression. To the best of our knowledge for the first time, we demonstrated the suppression of BMI-1 expression by shRNA after treatment with irradiation, indicating that BMI-1 may be an important gene for the gene targeted therapy of human esophageal carcinoma.
Acknowledgments
The present study was supported by the National Natural Science Foundation of China (no. 81372416) and the Medical Sciences Key Topics of Hebei Province (nos. 20160183 and 20150305).
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