Lentivirus‑mediated knockdown of chondroitin polymerizing factor inhibits glioma cell growth in vitro
- Authors:
- Published online on: June 19, 2017 https://doi.org/10.3892/or.2017.5731
- Pages: 1149-1155
Abstract
Introduction
In adults, glioma is the most common type of malignant tumor of the brain and central nervous system, characterized by rapid progression, aggressive behavior, frequent recurrence and poor prognosis (1,2). Despite advances in diagnosis and treatment, frequent recurrence and a low cure rate of glioma remain due to the rapid proliferation and high invasiveness of this disease, particularly for glioblastoma multiforme patients (3,4). It is in essence a genetic disease with overexpression of oncogenes and deletions or mutations of tumor-suppressor genes, which lead to the uncontrolled proliferation of cancer cells (5,6). Therefore, it is essential to investigate the underlying mechanisms of this disease.
A human cDNA encoding the novel protein chondroitin polymerizing factor (CHPF) which was initially discovered by Kitagawa et al in 2003, is essential for chondroitin polymerizing activity (7). In addition, knockdown of the expression of CHPF leads to specific elimination of chondroitin sulfate (CS) and dermatan sulfate. In recent years, more and more evidence has revealed the potential roles of CS in tumor biology. Notably, numerous studies have shown that the CS expression has been observed significantly increased in many human tumors, such as colon (8) and ovarian epithelial cancer (9). The gene encoding CHPF has been identified in humans (10) and mice (11). Thus, CHPF plays an important role in tumor progression. However, no studies have been carried out investigating the functional role of CHPF in human types of cancer, and particularly in glioma.
In the present study, we demonstrated that CHPF was highly expressed in human glioma tissues and 4 glioma cell lines. Consequently, we constructed a lentivirus vector mediating RNAi targeting of CHPF (LV-shRNA-CHPF). We employed the LV-shRNA-CHPF to determine whether CHPF affects the progression of human glioma in vitro.
Materials and methods
Cancer cell lines
The human glioma cell lines A172, U373, U251, U87 and the human renal epithelial 293T cells were purchased from the Shanghai Cell Bank (Shanghai, China). The cells were cultured in Dulbecco's modified Eagle's medium (DMEM) (Gibco, Carlsbad, CA, USA) containing 10% fetal bovine serum (Invitrogen, Carlsbad, CA, USA) in an incubator at 37°C with 5% CO2.
Patients and tissue samples
Patients with glioma (n=32) who underwent initial surgery at The Second Affiliated Hospital of Nanchang University between 2013 and 2015 were retrospectively selected for the present study. Normal brain tissues (n=10) were obtained from epileptic resections. Each patient participated after providing informed consent, and the use of the samples for research was approved by the Medical Ethics Committee of The Second Affiliated Hospital of Nanchang University. All specimens were immediately frozen in liquid nitrogen after resection and stored at −80°C until RNA extraction. No patients had received therapy before resection.
Quantitative real-time polymerase chain reaction (qRT-PCR) assay
Total RNA was isolated from the 4 glioma cell lines (A172, U373, U251 and U87) using TRIzol Total RNA Reagent (Invitrogen, Shanghai, China). Complementary DNA (cDNA) synthesis was performed with 2 µg of total RNA using the RevertAid™ H Minus First Strand cDNA Synthesis kit (Takara, Otsu, Japan). The CHPF primers were obtained from GeneChem Co. Ltd. (Shanghai, China), and GAPDH was used as an internal control. The primers used were as follows: CHPF forward, 5′-GGA ACG CAC GTA CCA GGAG-3′ and reverse, 5′-CAC CCT GTT GCT GTA GCC AAA-3′; and GAPDH forward, 5′-TGA CTT CAA CAG CGA CAC CCA-3′ and reverse, 5′-CAC CCT GTT GCT GTA GCC AAA-3′. Quantitative PCR was performed using the SYBR PrimeScript RT-PCR kit (Takara) on an Applied Biosystems 7300 fluorescence quantitative PCR system (Applied Biosystems, Foster City, CA, USA). The reaction mixtures were incubated at 95°C for 30 sec, followed by 45 amplification cycles at 95°C for 5 sec and 60°C for 30 sec. The PCR products of CHPF and GAPDH were 117 and 121 bp, respectively. The relative expression of the CHPF mRNA was calculated with the 2−ΔΔCt method, using the GAPDH mRNA expression level for normalization.
Construction of the shRNA lentiviral vector and cell transfection
The lentiviral expressing the short hairpin RNA (shRNA) targeting the sequence of the CHPF gene (CTGGCCATGCT ACTCTTTG) and negative control (NC) (TTCTCCGAACGT GTCACGT) were purchased from Shanghai GeneChem Co., Ltd. Then, they were cloned into the pGCSIL-GFP lentiviral vector with AgeI/EcoRI sites to form the recombinant lentiviral shRNA expression vector. Lentiviral vectors and packaging vectors were transfected into 293T cells using Lipofectamine 2000. Lentiviral particles were purified using ultracentrifugation and the titer of the lentiviruses was determined by endpoint dilution assay.
The U251 glioblastoma cells were infected with the shRNA-CHPF-lentivirus or the NC lentivirus. The U251 cells were seeded in a 6-well plate at 40% confluence with 4.0×105 cells/well. After 72 h of infection, the cells were observed under a fluorescence microscope (MicroPublisher 3.3RTV; Olympus, Tokyo, Japan). After 5 days of infection, the ability of the shRNA-CHPF vectors to knock down CHPF was investigated using quantitative PCR.
Western blot analysis
The cells were harvested at 48 h after transfection, and lysed with RIPA buffer for 30 min at 4°C. The protein concentration was determined using a BCA protein assay kit (Pierce, Rockford, IL, USA). Equal amounts of total protein of each treatment were separated using 12.5% SDS-PAGE according to Laemmli's method (12), and were then transferred onto polyvinylidene difluoride (PVDF) membranes. The first antibodies used were polyclonal mouse anti-CHPF (1:2,000 dilutions; Sigma-Aldrich® Co. LLC., St. Louis, MO, USA), and the anti-GAPDH antibody (1:2,000 dilution; Santa Cruz Biotechnology, Santa Cruz, CA, USA). The secondary antibody was anti-goat IgG-conjugated with horseradish peroxidase at a dilution of 1:2,000. The bound antibodies were detected using the Enhanced Chemiluminescence Plus Western Blotting Detection system (GE Healthcare, Bethesda, MD, USA). GAPDH was used as an internal control to normalize the CHPF expression levels.
Cell growth and MTT cell proliferation assays
Cell growth was assessed using multiparametric high-content screening (HCS). U251 cells at the logarithmic phase after being infected with either the NC or shRNA-CHPF lentiviruses were seeded at 2×103 cells/well in 96-well tissue culture plates, and incubated at 37°C for 1–5 days. The cells in the plates were counted using the Cellomics ArrayScan™ VT1 HCS automated reader (Cellomics, Inc., Pittsburgh, PA, USA) for daily analysis. In each well, at least 800 cells were analyzed. All experiments were performed in triplicate.
In vitro cell proliferation was determined using an MTT cell proliferation assay kit as described by the manufacturer [American Type Culture Collection (ATCC) Manassas, VA, USA]. At the end of the culture period, the cells were washed with phosphate-buffered saline, the MTT reagents were then added according to the manufacturer's recommendations, and the absorbance was assessed at 570 nm using a microplate reader. Each experiment was repeated 3 times in duplicate.
Apoptosis and cell cycle analysis using flow cytometry
Annexin V-FITC/propidium iodide (PI) double labeling was used to determine the cell cycle distribution or detect apoptosis. U251 cells were infected with the shRNA-CHPF or NC plasmids and incubated at 37°C. U251 cells were harvested by trypsinization and incubated with FITC-conjugated Annexin V and PI according to the manufacturer's instructions (KeyGen Biotech, Nanjing, China). FACSCalibur II sorter and Cell Quest Research Software (BD Biosciences, San Diego, CA, USA) were used for analysis. To further confirm the changes of DNA content distribution in the shRNA-CHPF-treated cells, we performed PI staining. The cells of different groups were collected and fixed in 70% ethanol at 4°C overnight. After incubation with 50 µg/ml of PI and RNase A (Sigma-Aldrich) for 30 min at 37°C in the dark, the cells were subjected to FACS analysis as described above. All experiments were performed in triplicate.
Statistical analysis
All statistical analyses were implemented in the SPSS 20.0 statistical software package. All data are presented as the means ± standard deviations (SD) and the experiments were repeated 3 times. The Student's t-test was used for raw data analysis. A P-value of <0.05 was considered to indicate a statistically significant result.
Results
CHPF mRNA detection in 4 human glioma cell lines
The expression levels of CHPF mRNA were examined in glioma cell lines A172, U373, U251 and U87 by quantitative RT-PCR. The results revealed that CHPF mRNA was expressed in all 4 cell lines (Fig. 1).
CHPF is overexpressed in human glioma tissues
In order to determine whether CHPF was involved in the regulation of tumorigenesis of human glioma we assessed the CHPF expression level in glioma tissue specimens and normal brain tissues. Quantitative RT-PCR assays revealed that the mRNA levels of CHPF in gliomas tissues were significantly higher than those in normal brain tissues. The average expression level of CHPF in gliomas tissues was 2.484 and in normal brain tissues it was 1.231 (P<0.01; Fig. 2). This result demonstrated that CHPF was upregulated in glioma tissues compared with normal brain tissues.
Knockdown efficiency determined by western blot analysis
Human renal epithelial 293T cells were infected with shRNA-CHPF or NC lentiviruses. The protein levels of CHPF were assessed using western blotting in 293T cells. shRNA-CHPF-infected cultures had a significantly lower level of CHPF compared to the shRNA-Ctrl-infected cultures (Fig. 3).
Knockdown of CHPF by the shRNA lentiviral system in human glioma cell line U251
To explore the role of CHPF in glioma, shRNA-CHPF and shRNA-Ctrl expressing GFP were generated and infected into human glioma cell line U251. The concentration dose of the shRNA-CHPF used was 4×108 TU/ml. More than 80% of the cells exhibited positive green fluorescence in both the shRNA-CHPF and shRNA-Ctrl groups, indicating the successful lentiviral infection (Fig. 4A). The knockdown effect was analyzed by qRT-PCR. At 5 days post-infection, the CHPF mRNA level of U251 cells infected with shRNA-CHPF (0.477±0.034) was significantly lower than that infected with the shRNA-Ctrl (1.001±0.065) (Fig. 4B).
Knockdown of CHPF noticeably inhibits U251 cell growth
To examine the effect of CHPF on cell growth, U251 cells expressing either the shRNA-CHPF or shRNA-Ctrl were seeded into 96-well plates and analyzed by Cellomics daily for 5 days. As shown in Fig. 5, the cell proliferation level in the shRNA-CHPF group remained lower from the second day after infection, and the gap between the shRNA-CHPF and shRNA-Ctrl groups increased with time. The results of the present study revealed that CHPF knockdown significantly inhibited the growth of the U251 cells.
To further evaluate the effect of CHPF on the regulation of glioma cell proliferation, an MTT assay was applied in U251 cells. As shown in Fig. 6, knockdown of CHPF expression markedly decreased the proliferation potential from day 2 (P<0.01). The growth of U251 cells treated with the shRNA-CHPF lentivirus was markedly inhibited compared to the shRNA-Ctrl group. The shRNA-CHPF cells had significantly decreased in vitro growth on days 4 (shCtrl, 5.64±0.04 vs. shCHPF 2.96±0.05; P<0.01) and 5 (shCtrl, 10.03±0.28 vs. shCHPF, 3.67±0.07; P<0.01). Based on these data, in vitro U251 cell growth was dependent on CHPF expression.
Inhibition of CHPF induces G0/G1 phase arrest in glioma U251 cells
To ascertain whether CHPF is necessary for cell cycle progression in U251 cells, we assessed the cell cycle phases in U251 cells by flow cytometry. As shown in Fig. 7, the shRNA-CHPF group displayed the following: G0/G1 phase, 65.57±0.42%; S phase, 18.48±0.26%; and G2/M phase, 15.95±0.32%, and the shRNA-Ctrl group displayed the following distribution: G0/G1 phase, 53.42±0.23%; S phase, 30.49±0.70%; and G2/M phase, 16.10±0.50%. With the absence of CHPF, the number of cells entering the G0/G1 phase increased by 22.7% (P<0.05) and the cells entering the S phase decreased by 39.4% (P<0.01). In conclusion, these data revealed that CHPF regulated U251 cell growth and blocked cell cycle progression in the G0/G1 phase.
CHPF knockdown increases glioma U251 cell apoptosis
We further examined the effect of knockdown of CHPF on the cell apoptosis of glioma U251 cells by flow cytometry. The apoptosis percentage of U251 cells in the shRNA-CHPF group (10.30±0.16)% was significantly higher (P<0.05) than in the shRNA-Ctrl group (4.99±0.09)% (Fig. 8). These results indicated that CHPF silencing inhibited the proliferation of U251 cells by inducing G0/G1 phase cell cycle arrest and apoptosis.
Discussion
Glioma, particularly glioblastoma, has a poor prognosis (4,13). It is one of the most common highly vascularized malignant tumors of the CNS, with a ≤12-month median survival period (5,14). Therefore, it is essential to investigate the mechanisms involved in glioma initiation and progression.
Chondroitin sulfate (CS) is a polysaccharide consisting of repeating disaccharide units of N-acetyl-D-galactosamine and D-glucuronic acid residues, modified with sulfated residues at various positions (11). CS biosynthesis and sulfation balance are tightly controlled and play important roles in the progression of the disease (15,16). In addition, the specific sulfation pattern of CS chains dictates its function and binding affinities (17,18). Previous studies utilizing inhibitors or enzymes which degrade CS chains indicate that CS has a considerable effect on the processes of tumor metastasis, proliferation and adhesion (19,20). The identification of CHPF, a unique protein factor required for chondroitin polymerization activity, may shed light on the molecular basis of CS. Therefore, CHPF may play an important role in tumor progression. However, to date, only 3 studies have revealed the expression level of CHPF in cancer, including colorectal cancer (10), head and neck squamous cell carcinoma (21) and laryngeal cancer (22). To date, the function and the role of CHPF in human types of cancer remain unknown. Therefore, we employed LV-shRNA-CHPF to determine whether CHPF has effects on the progression of human glioma in vitro.
In the present study, we firstly demonstrated that CHPF was highly expressed in human glioma tissues and 4 glioma cell lines. To explore the role of CHPF in glioma, a lentiviral vector expressing CHPF shRNA was constructed and transfected into the glioma U251 cells, which stably downregulated the expression levels of the CHPF gene in U251 cells in vitro. Compared to the shRNA-Ctrl group of cells, the shRNA-CHPF group of cells exhibited decreased proliferation and a significant increase in the proportion of cells in the G0/G1 phase. In addition, we found that knockdown of the expression of CHPF increased apoptosis in glioma U251 cells. Therefore, our results confirmed that CHPF promotes glioma U251 cell growth. Further validation and functional evaluation are warranted to assess the role of CHPF in other glioma cell lines and the mechanism underlying this association.
In conclusion, our findings indicate that CHPF plays an important role in the progression of human glioma. A high level of expression of CHPF was found in human glioma tissues and 4 glioma cell lines. Downregulation of CHPF expression by the shRNA-CHPF lentiviral vector inhibited glioma U251 cell proliferation and induced cell apoptosis. This demonstrated that CHPF may be a novel target in the clinical treatment of gliomas.
Acknowledgements
The present study was supported by the National Natural Science Foundation of China (grant no. 81660420), the Construction Plan of the Superior Science and Technology Innovation Team of Jiangxi Province (grants no. 20152BCB24009), and the Foreign Science and Technology Cooperation Plan of Jiangxi Province (grants no. 20151BDH80009).
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