MicroRNA-379 acts as a tumor suppressor in non-small cell lung cancer by targeting the IGF‑1R-mediated AKT and ERK pathways
Retraction in: /10.3892/or.2022.8339
- Authors:
- Published online on: July 18, 2017 https://doi.org/10.3892/or.2017.5835
- Pages: 1857-1866
Abstract
Introduction
Lung cancer is one of the most common types of malignancy in humans and a leading cause of cancer-related deaths among men and women worldwide (1). In developing countries, especially in China, lung cancer is the most common and the leading cause of cancer-related deaths (2). Environmental pollution, tobacco epidemic, second-hand smoke and occupational carcinogens increase the incidence and mortality burden of lung cancer (3,4). Among the types of lung cancer, non-small cell lung cancer (NSCLC) is responsible for ~90% of lung cancer cases (5). In total, 32–40% types of NSCLC are adenocarcinoma, followed by squamous (25–30%) and large cell (8–16%) (6). Despite the great progress in surgery combined with radiotherapy and/or chemotherapy of NSCLC, many patients still have poor prognosis and only 6% of a 5-year survival rate (3,7,8). The prognosis for patients with NSCLC is deeply rooted with diagnosis at an advanced stage, local invasion and/or distant metastases and high rate of recurrence after surgery (9–11). Accordingly, the molecular mechanisms that govern NSCLC formation and progression should be urgently understood to develop novel therapeutic targets for the treatment of this disease.
MicroRNAs (miRNAs) are a large group of endogenous, short and non-coding RNA molecules of 21–25 nucleotides; these RNAs are encoded by distinct genes and undergo a sophisticated process to mature and evolutionarily conserved their single-stranded forms (12). Mature miRNAs usually bind to the 3′-untranslated regions (3′-UTRs) of target genes to downregulate the expression of target genes at post-transcriptional levels by inducing the degradation or inhibiting the translation of the targeted mRNA (13,14). Through mediation of their target genes, miRNAs play important roles in the regulation of various physiological and pathological processes, such as cell proliferation, cycle, apoptosis, differentiation, invasion, migration, metastasis and angiogenesis (15–17). Strong evidence recently revealed that miRNAs are downregulated or upregulated in a variety of human malignancies, such as gastric cancer (18), hepatocellular carcinoma (19), prostate cancer (20), renal cell carcinoma (21), glioma (22) and lung cancer (23). Moreover, numerous studies reported that the dysregulation of miRNAs is involved in tumorigenesis and tumor development; some miRNAs act as an oncogene or tumor suppressor gene in human cancers, depending on the regulated tumor forms and their specific target genes (24). Therefore, these findings suggested that miRNAs can be applied for cancer diagnosis and prognosis and can also act as potential novel therapeutic targets.
miR-379 is dysregulated in several types of human cancer, including breast cancer (25), prostate cancer (26), hepatocellular carcinoma (27) and osteosarcoma (28). miR-379 was also found to be downregulated in NSCLC (29). However, biological roles of miR-379 in NSCLC remains to be elucidated. This study investigated the expression level, possible roles and underlying molecular mechanisms of miR-379 in NSCLC.
Materials and methods
Ethics approval and tissue samples
This study was approved by the Ethics Committee of Suizhou Hospital, and was performed in accordance with the Declaration of Helsinki. Written informed consents were also obtained from all studied patients with NSCLC. NSCLC tissues (n=49) and corresponding adjacent normal tissues (n=49) were collected from NSCLC patients who underwent surgery resection at Suizhou Hospital between March 2013 and May 2015. None of these patients were treated with antitumor treatment such as chemotherapy or radiotherapy prior to surgery. Tissues were immediately frozen in liquid nitrogen after harvesting from fresh lung tissue, and stored at −80°C until further use.
Cell culture and transfection
Human NSCLC cell lines (H460, A549, H1299 and SPC-A-1) and normal human lung epithelial cell line BEAS-2B were purchased from the Shanghai Institute of Biochemistry and Cell Biology (Shanghai, China). All cells were grown in Dulbecco's modified Eagle's medium (DMEM; Gibco; Thermo Fisher Scientific, Waltham, MA, USA) containing 10% fetal bovine serum (FBS), 100 U/ml penicillin and 100 mg/ml streptomycin (Gibco; Thermo Fisher Scientific) in a 37°C humidified incubator with 5% CO2.
For functional experiments, miR-379 mimics, miRNA mimics negative control (miR-NC), small interfering RNA (siRNA) targeting IGF-1R (IGF-1R siRNA) and negative control of siRNA (NC siRNA) were obtained from GenePharma Co., Ltd. (Shanghai, China). pcDNA3.1-IGF-1R plasmid and blank pcDNA3.1 vector were synthesised by Chinese Academy of Sciences (Changchun, China). One day before the transfection, cells were collected and seeded into 6-well plates at a density of 70–80%. miR-379 mimics, miR-NC, IGF-1R siRNA, NC siRNA, pcDNA3.1 and pcDNA3.1-IGF-1R were separately transfected into cells using Lipofectamine 2000 (Invitrogen; Thermo Fisher Scientific). All transfection manipulations were performed according to official protocol. After incubating for 6–8 h, the culture medium was replaced by DMEM supplemented with 10% FBS.
RNA extraction and reverse transcription-quantitative polymerase chain reaction (RT-qPCR) assays
Total RNA was isolated from tissue samples and cell lines using TRIzol reagent (Invitrogen; Thermo Fisher Scientific) according to the manufacturer's protocol. For the detection of miR-379 expression, complementary DNA (cDNA) was synthesised using TaqMan MicroRNA Reverse Transcription kit (Applied Biosystems, Foster City, CA, USA), and qPCR was then performed using a TaqMan MicroRNA PCR kit (Applied Biosystems) on an Applied Biosystem 7500 Real-time PCR system (Applied Biosystems; Thermo Fisher Scientific). To quantify IGF-1R mRNA, total RNA was used for reverse transcription using M-MLV (Promega, Madison, WI, USA). The qPCR reaction of IGF-1R mRNA was conducted using SYBR Premix Ex Taq™ (Takara Biotechnology Co., Ltd., Dalian, China). The relative expression of miR-379 and IGF-1R mRNA were normalised to the levels of RNU6B and GAPDH, respectively. The sequences of the primers used in this assay are listed in Table I. Data were analysed using ∆∆Cq method (30).
3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay
The proliferation of cells was measured using the MTT assay (Sigma-Aldrich, St. Louis, MO, USA). Cells were plated in 96-well plates at a density of 3,000 cells/well. After overnight incubation, cells were transfected and incubated at 37°C in a humidified incubator with 5% CO2 for 0, 24, 48 and 72 h. At each time-point, cells were incubated with 20 µl of MTT solution (5 mg/ml) at 37°C. Subsequent to incubation for 4 h, the culture medium containing MTT solution was carefully removed, and 150 µl of dimethyl sulfoxide (DMSO; Sigma-Aldrich) was added into each well to solubilise the crystals. After gently shaking for 10 min, the optical density (OD) was determined at 490 nm using an automatic multi-well spectrophotometer (Bio-Rad Laboratories, Inc., Hercules, CA, USA).
Transwell migration and invasion assays
Migration and invasion assays were conducted using Transwell chambers with an 8-µm pore polycarbonate membrane (Costar; Corning Inc., Corning, NY, USA). For the determination of cell migration, transfected cells were collected at 48 h post-transfection and suspended in FBS-free culture medium. Briefly, 5×104 transfected cells were then plated in the upper chamber, following the addition of DMEM with 20% FBS to the lower chamber to act as a chemoattractant. The Transwell chambers were incubated at 37°C in 5% CO2 for 24 h, and the non-migrating cells were removed by a wet cotton swab. Cells that migrated through the membrane were fixed with 100% methanol, stained with 0.5% crystal violet, washed with cold phosphate-buffered saline, dried in air and subjected to microscopic inspection (magnification, ×200). Transwell invasion assay was performed in a parallel manner, except that the Transwell chambers were coated with Matrigel (BD Biosciences, San Jose, CA, USA). Values for migration and invasion were obtained by counting five fields per membrane and represent the average of three independent experiments.
miR-379 target prediction
miRNA target prediction algorithms: PicTar (http://pictar.mdcberlin.de/) and TargetScan (http://www.targetscan.org/) were used to predicate the putative targets of miR-379.
Luciferase reporter assay
The luciferase plasmids pmirGLO-IGF-1R-3′-UTR wild-type (WT) and pmirGLO-IGF-1R-3′-UTR mutant (MUT) were synthesized by GenePharma Co., Ltd. Cells were seeded into 24-well plates at a confluence of 40–50%. After incubation overnight, each luciferase plasmid was co-transfected into cells with miR-379 mimics or miR-NC using Lipofectamine 2000. Forty-eight hours after transfection, the firefly and Renilla luciferase activities were detected using the Dual-Luciferase Reporter system (Promega) in accordance with the manufacturer's instructions. The firefly luciferase activity was normalized to the Renilla luciferase activity. Each assay was performed in triplicate and repeated three times.
Western blotting
Total protein was extracted from tissues and cells using cold radioimmunoprecipitation assay lysis buffer (Beyotime Biotechnology Inc., Shanghai, China) supplemented with complete protease inhibitor cocktail (Roche Diagnostics, Mannheim, Germany). The protein concentration was measured by using a bicinchoninic acid assay kit (Nanjing KeyGen Biotech Co., Ltd., Nanjing, China) according to the manufacturer's protocols. Equal amounts of protein were separated by SDS-polyacrylamide gel electrophoresis on 10% gels and transferred to polyvinylidene fluoride membranes (EMD Millipore, Billerica, MA, USA). The membranes were blocked with Tris-buffered saline solution containing 0.1% Tween-20 (TBST) and 5% skim milk at room temperature for 1 h and were incubated with primary antibodies overnight at 4°C. After washing three times with TBST, the membrane was incubated with the horseradish peroxidase-conjugated IgG secondary antibody (sc-2005; 1:3,000 dilution; Santa Cruz Biotechnology, CA, USA) for 2 h at room temperature. An enhanced chemiluminescence kit (Pierce; Thermo Fisher Scientific, Inc.) was used to visualise the protein bands. Primary antibodies used in this study includes mouse anti-human monoclonal IGF-1R antibody (sc-81464; 1:1,000 dilution; Santa Cruz Biotechnology), mouse anti-human monoclonal ERK antibody (sc-135900; 1:1,000 dilution; Santa Cruz Biotechnology), mouse anti-human monoclonal p-ERK antibody (sc-81492; 1:1,000 dilution; Santa Cruz Biotechnology), mouse anti-human monoclonal AKT antibody (sc-81434; 1:1,000 dilution; Santa Cruz Biotechnology), mouse anti-human monoclonal p-AKT antibody (sc-271966; 1:1,000 dilution; Santa Cruz Biotechnology) and mouse anti-human monoclonal GAPDH antibody (sc-47724; 1:1,000 dilution; Santa Cruz Biotechnology). Protein bands were normalised to GAPDH and analysed using the Quantity One software version 4.4 (Bio-Rad Laboratories, Inc.).
Statistical analysis
All data were expressed as mean ± SD and analyzed by using Student's t tests or one-way ANOVA with SPSS 19.0 software (SPSS, Chicago, IL, USA). Pearson's χ2 test was adopted to investigate the association between miR-379 and clinicopathological factors in NSCLC. Spearman's correlation analysis was utilized to evaluate the association between miR-379 and IGF-1R mRNA expression in NSCLC tissues. P-value <0.05 was considered statistically significant.
Results
miR-379 is downregulated in NSCLC tissues and cell lines
To investigate the role of miR-379 in NSCLC, we measured miR-379 expression levels in 49 paired NSCLC tissues and their corresponding adjacent normal tissues. The results of RT-qPCR showed that miR-379 expression in NSCLC tissues was significantly reduced compared with that in corresponding adjacent normal tissues (Fig. 1A, P<0.05). The expression level of miR-379 in NSCLC cell lines and normal human lung epithelial cell line BEAS-2B was examined to confirm the downregulation of miR-379 in NSCLC. As shown in Fig. 1B, miR-379 was downregulated in all NSCLC cell lines compared with that in BEAS-2B (P<0.05). H460 and A549 were selected for further functional experiments due to the low level of miR-379. Thus, miR-379 was downregulated in both NSCLC tissues and cell lines.
Association between miR-379 expression and clinicopathologic features of NSCLC
The association between miR-379 and clinicopathological factors in NSCLC was further analysed by Pearson's χ2 test. As shown in Table II, low miR-379 expression was correlated with TNM stage (P=0.032) and lymph node metastasis (P=0.016). However, no significant correlation was observed with gender (P=0.509), age (P=0.181), smoking status (P=0.9472), and tumor size (P=0.821).
Table II.Association between microRNA-379 expression and clinicopathological features of non-small cell lung cancer. |
Upregulation of miR-379 inhibits NSCLC cell proliferation, migration and invasion in vitro
We then explored the potential effects of miR-379 in NSCLC cell proliferation, migration and invasion in H460 and A549 cells. H460 and A549 cells were treated with miR-379 mimics or miR-NC. miR-379 expression was subsequently determined by RT-qPCR. The results showed that after transfection with miR-379 mimics, miR-379 was markedly upregulated in H460 and A549 cells compared with cells transfected with miR-NC (Fig. 2A and B, P<0.05). MTT assay was used to evaluate the effect of miR-379 overexpression on NSCLC cell proliferation. As shown in Fig. 2C and D, cell proliferation was markedly reduced by miR-379 overexpression in both H460 and A549 cells (P<0.05). In addition, the effects of miR-379 re-expression on cell migration and invasion of NSCLC were examined. Results revealed that H460 and A549 cells transfected with miR-379 mimic presented less migration and invasion capacities than in the cells transfected with miR-NC (Fig. 2E and F, P<0.05). These results suggested that miR-379 acts as a tumor suppressor in NSCLC cell growth and metastasis.
IGF-1R is a novel target of the directly bound miR-379 in NSCLC
miRNA exerts its biological roles mainly through the negative regulation of its targets. Hence, the targets of miR-379 were investigated. Bioinformatic analysis was performed to predict the putative target genes of miR-379. Among these candidate targets, IGF-1R was selected for further target validation (Fig. 3A) because this gene is abnormally upregulated in NSCLC tissues and is implicated in NSCLC initiation and progression (31–33). Luciferase reporter assay was further conducted to explore whether miR-379 directly targets the 3′UTR of IGF-1R. H460 and A549 cells were co-transfected with miR-379 mimics or miR-NC, as well as pmirGLO-IGF-1R-3′-UTR WT or pmirGLO-IGF-1R-3′-UTR MUT. As shown in Fig. 3B, the luciferase plasmid with wild-type 3′-UTR of IGF-1R showed decreased luciferase activities in both H460 and A549 cells transfected with miR-379 mimics (P<0.05), whereas the mutated 3′-UTR of IGF-1R showed no change in its luciferase activity. We confirmed whether miR-379 negatively regulates the mRNA and protein levels of IGF-1R in H460 and A549 cells. The results showed that the restored expression of miR-379 suppressed the endogenous IGF-1R expression in H460 and A549 cells at both mRNA and protein levels (Fig. 3C and D, P<0.05). These results revealed that IGF-1R is a direct target of miR-379 in NSCLC.
IGF-1R is upregulated in NSCLC and inversely correlated with miR-379 expression level
We further measured IGF-1R expression in NSCLC tissues and their corresponding adjacent normal tissues. RT-qPCR results revealed that NSCLC tissues showed increased IGF-1R mRNA expression (Fig. 4A, P<0.05). Western blotting also revealed that IGF-1R protein expression was upregulated in NSCLC tissues compared with that in corresponding adjacent normal tissues (Fig. 4B, P<0.05). Moreover, we observed a negative correlation between miR-379 and IGF-1R mRNA in NSCLC tissues (Fig. 4C; r=−0.5357, P<0.0001), which further suggested that the upregulation of IGF-1R in NSCLC is a result of the declined expression of miR-379.
IGF-1R knockdown represses NSCLC cell proliferation, migration and invasion in vitro
To investigate whether IGF-1R knockdown has tumor suppressive effect similar to that of miR-379 overexpression in NSCLC, we used IGF-1R siRNA to knock down the endogenous IGF-1R expressions in H460 and A549 cells. Western blotting showed that IGF-1R siRNA significantly downregulated IGF-1R expression in H460 and A549 cells (Fig. 5A, P<0.05). MTT assay was performed to investigate the effect of IGF-1R knockdown on NSCLC cell proliferation. As shown in Fig. 5B and C, the downregulation of IGF-1R significantly suppressed the proliferation in H460 and A549 cells, which is similar to the effect of miR-379 upregulation (P<0.05). Transwell migration and invasion assays were then used to examine NSCLC cell migration and invasion, and it was found that downregulation of IGF-1R suppressed the migration and invasion of H460 and A549 cells (Fig. 5D and E, P<0.05). Similar to miR-379 overexpression, IGF-1R knockdown had tumor suppressive roles on NSCLC cell proliferation, migration and invasion, which further suggested that IGF-1R is a functional downstream target of miR-379 in NSCLC.
Overexpression of IGF-1R rescues the tumor suppressive effects of miR-379 in NSCLC
Rescue experiments were conducted to evaluate whether IGF-1R is responsible for the functional roles of miR-379 in NSCLC. pcDNA3.1-IGF-1R or pcDNA3.1 was introduced into H460 and A549 cells. Western blotting confirmed that IGF-1R was upregulated in H460 and A549 cells, following the transfection with pcDNA3.1-IGF-1R (Fig. 6A, P<0.05). Rescue experiments revealed that the increased expression of IGF-1R markedly reversed the inhibitory effects of miR-379 overexpression on cell proliferation (Fig. 6B and C, P<0.05), migration and invasion (Fig. 6D and E, P<0.05) in H460 and A549 cells, which further suggested that IGF-1R mediates the functional roles of miR-379 in NSCLC.
miR-379 inhibits AKT and ERK signaling pathways in NSCLC
Previous studies reported that IGF-1R activation triggers the phosphoinositide 3-kinase (PI3K)/AKT and mitogen-activated protein kinase (MAPK)/ERK pathways (34–37). Therefore, we examined the possibility that the ectopic expression of miR-379 inhibits AKT and EKR pathways by targeting IGF-1R. Western blotting showed that miR-379 mimics decreased p-ERK and p-AKT expressions without changing the total AKT and ERK expressions in H460 and A549 cells (Fig. 7, P<0.05). In addition, we also observed that p-ERK and p-AKT were recovered in miR-379 mimic-transfected H460 and A549 cells after transfection with pcDNA3.1-IGF-1R. These results suggested that miR-379 exerts tumor-suppressing roles in NSCLC cells by directly targeting IGF-1R and indirectly regulating the AKT and ERK signaling pathways.
Discussion
Emerging data showed that miRNAs play significant roles in various human cancers, including NSCLC (38–40). Aberrantly expressed miRNAs in NSCLC contribute to tumor occurrence and development as either tumor suppressors or promoters (41). Therefore, the identification of specific miRNAs and their targets in lung cancer provides novel and efficient therapeutic methods for patients with this malignancy. In this study, we found that miR-379 was significantly downregulated in NSCLC tissues and cell lines. Low miR-379 expression was correlated with TNM stages and lymph node metastasis. Function experiments revealed that the restored expression of miR-379 suppressed cell proliferation, migration and invasion in NSCLC. Additionally, IGF-1R was confirmed as a direct target of miR-379 in NSCLC. Moreover, miR-379 overexpression inhibited the AKT and ERK signaling pathways in NSCLC. These findings suggested that miR-379 serves as a promising therapeutic target for the treatment of patients with NSCLC.
miR-379 is located at 14q32.31 and is abnormally expressed in several types of human cancer. For example, in breast cancer, miR-379 is downregulated in tumor tissues. The expression level of miR-379 significantly decreases with increasing tumor stage (25). In prostate cancer, miR-379 is highly expressed in the cell lines and tissues of bone metastatic prostate cancer. In addition, miR-379 expression is associated with progression-free survival of patients with prostate cancer (26). Reduced miR-379 expression level was also observed in hepatocellular carcinoma tissues and cell lines. Low miR-379 expression is strongly correlated with advanced TNM stage and metastasis in hepatocellular carcinoma (27). Additional study revealed that osteosarcoma tissues and cells exhibit low miR-379 expression (28). These findings suggested that the aberrant expression of miR-379 is a potential prognostic factor in these cancer types.
miR-379 is a tumor suppressor in numerous types of human cancer. Khan et al reported that the upregulation of miR-379 inhibits cell growth in breast cancer through the negative regulation of cyclin B1 (25). Yamamoto et al found that the restored expression of miR-379 targets IL8 to repress the invasion of malignant pleural mesothelioma cells and increase the chemosensitivity to pemetrexed and vorinostat (42). Chen and his colleagues reported that miR-379 overexpression suppresses cell migration, invasion, epithelial-to-mesenchymal transition and metastasis by targeting FAK/AKT signaling pathway in hepatocellular carcinoma (27). Li et al revealed that the ectopic expression of miR-379 attenuates cell proliferation and invasion in vitro and reduces the growth of osteosarcoma xenografts in vivo via the blockage of PDK1 (28). These findings suggested that miR-379 acts as a tumor suppressor and should be investigated as a potential anticancer drug for these cancer types.
Subsequently, we focused on the underlying molecular mechanism on how miR-379 executes its biological roles in NSCLC. Analysis of online bioinformatics predicted that IGF-1R is a potential target gene of miR-379. Luciferase reporter assay was then performed to test whether miR-379 directly targets the 3′UTR of IGF-1R. This assay revealed that miR-379 mimics reduced the luciferase activities of plasmid carrying wild-type IGF-1R 3′-UTR, whereas mutated 3′-UTR showed no change in its luciferase activity. Furthermore, RT-qPCR and western blotting revealed that the upregulation of miR-379 reduced the endogenous IGF-1R mRNA and protein expressions in NSCLC cells. Moreover, we further revealed the inverse correlation between miR-379 and IGF-1R expression in NSCLC tissues. In addition, the knockdown of IGF-1R mimicked the tumor suppressive effects of miR-379 on NSCLC cells. Finally, IGF-1R re-expression markedly rescued the inhibitory effects on NSCLC cells induced by miR-379 overexpression. Collectively, these results provide the first insight on the key role of miR-379/IGF-1R axis in the mechanism of NSCLC occurrence and development.
IGF-1R is a transmembrane tyrosine kinase receptor of the insulin receptor family and is composed of two extracellular α subunits with the ligand-binding site and two transmembrane β subunits with intracellular tyrosine kinase activity (43). Elevated expression of IGF-1R was reported in numerous types of cancer, such as hepatocellular carcinoma (44), osteosarcoma (45), prostate cancer (46), renal cell carcinoma (47), gastric cancer (48) and bladder cancer (49). The intracellular signaling of IGF-1R is mediated by IGF-1, which in turn activates the PI3K/AKT and MAPK/ERK pathways (50) and performs vital functions in a wide range of biological processes, including cell proliferation, cycle, apoptosis, cellular development, migration, invasion and distant metastasis (51–53). Abundant evidence has revealed that IGF-1R is highly expressed in NSCLC tissues and involved in the formation and progression of NSCLC (54–56). This study revealed that miR-379 reduced the NSCLC cell growth and metastasis by directly targeting IGF-1R and indirectly regulating the PI3K/AKT and MAPK/ERK signaling pathways. These findings suggested that miR-379 should be investigated as a therapeutic target for inhibiting the rapid growth and metastasis of NSCLC.
In conclusion, this study revealed the critical roles of miR-379 in the negative regulation of NSCLC tumorigenesis and progression. Importantly, a novel link between miR-379 and IGF-1R in NSCLC was identified. Our findings encourage and suggest that miR-379 is a potential future therapeutic target for the treatment of NSCLC.
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