Patient‑derived orthotopic xenograft glioma models fail to replicate the magnetic resonance imaging features of the original patient tumor
- Authors:
- Published online on: March 9, 2020 https://doi.org/10.3892/or.2020.7538
- Pages: 1619-1629
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Copyright: © Xue et al. This is an open access article distributed under the terms of Creative Commons Attribution License.
Abstract
Introduction
Patient-derived xenograft (PDX) models are valuable tools for preclinical cancer research studies (1). Several studies have reported that patient-derived glioma stem cells (GSCs) maintain the phenotype and genotype characteristics of the original tumors (2–4), and GSC-derived xenografts recapitulate the distinctive cytological hallmarks and diverse histological variants of the original tumors (5). Therefore, PDX glioma models have been considered as reliable tools to explore the biological characteristics, therapeutic response and imaging biomarkers of glioma (6).
Magnetic resonance imaging (MRI) is widely used for clinical diagnosis, monitoring treatment and prognostic evaluation of gliomas (7–9). Conventional MRI, including T1-weighted and T2-weighted imaging provides information on the anatomical structures of tumors and surrounding tissues (10). Diffusion weighted imaging (DWI)-MRI allows for non-invasive evaluation of the random motion of water molecules (11), and the apparent diffusion coefficient (ADC) value quantitatively and accurately reflects the dispersion of water molecules and the density of tumor cells, respectively, thereby providing information on the growth and proliferation of tumor cells (12).
Dynamic contrast-enhanced (DCE)-MRI technology uses two compartment models to determine the change in the concentration of the contrast agent over time. The transfer coefficient (Ktrans) derived from DCE-MRI can be used to reflect the permeability of blood vessels, whereas the plasma volume parameter (Vp) can be used to reflect plasma volume. Furthermore, the volume fraction of the extravascular extracellular space (Ve) can be used to reflect the volume of extracellular space outside of the blood vessel. Finally, the rate transfer coefficient (Kep) can be used to reflect the reflux rate of the contrast agent via the changes in signal intensity of the contrast agent over time in the blood vessels and extravascular spaces (13,14). These MRI features are closely associated with the histological classification and metabolic process of glioma (15,16), which can reflect the molecular characteristics (17) and genotype (18) of this tumor type, and thus provide a reliable basis for individualized diagnosis and treatment (19).
However, whether the MRI features obtained from patient-derived glioma xenograft models, which reflect the biological characteristics and therapeutic response to glioma, are equally applicable to the original human tumors has not been determined, to the best of our knowledge. Therefore, the aim of the present study was to examine the differences noted in the characteristics of conventional MRI, DWI-MRI and DCE-MRI methods between the original tumors and the corresponding patient-derived orthotopic glioma xenografts. The aim of the present study was to provide an experimental basis for the clinical application of xenograft-derived MRI biomarkers.
Materials and methods
Clinical cases and experimental animals
The subjects recruited for the present study provided informed consent and consent for publication. Consent for involvement of patients without the ability to suitably make their own decisions was provided by their legal guardian. Surgical specimens from 7 patients (referred to as patients 1–7) with primary high-grade glioma who underwent surgery at the Daping Hospital were collected between December 2016 and December 2017. Tumors were graded according to the World Health Organization (WHO) classification of tumors of the nervous system (20). Each tumor specimen was divided into three sections under sterile conditions. The first section was used to extract primary tumor stem cell spheres, which were subsequently used to establish orthotopic xenograft models. The second section was embedded in paraffin for histopathological analysis and the third section was used for transcriptome sequencing. The study involving patients was approved by the Human Research Ethics Committees of Daping Hospital at the Army Medical University (Chongqing, China; approval no. 2014-9).
The xenografts were grown, and MRI was performed on the tumor-bearing mice during the later stages of tumor growth. Tumor tissues were obtained for histopathological staining and transcriptome sequencing. All non-obese diabetic-severe-combined immunodeficiency (NOD-SCID) nude mice used in the present study were purchased from the Department of Experimental Animals (Daping Hospital, Army Medical University). All protocols involving the use of animals were performed according to the International Principles of Laboratory Animal Care (21) and were approved by the Animal Use Subcommittee of the Daping Hospital at the Army Medical University. Tumor-bearing mice were sacrificed via cervical vertebra dislocation when they exhibited clinical signs that suggested impending death, such as emaciation, weakness or obvious spinal curvature. Confirmation of euthanasia was performed by assessing cardiac arrest and mydriasis. All mice included in the present study exhibited a single tumor, the maximum level of cachexia observed was a body weight loss ≤20% compared with the age-matched controls. The mean diameter of the xenograft was <1.2 cm and the maximum diameter was 1.27 cm.
Magnetic resonance scanning and post-processing of patients
MRI scans were performed using a 3.0 Tesla MRI scanner (Magnetom Verio; Siemens AG) with a 16-channel head coil. The conventional MRI included axial and sagittal T1-weighted, and T2-weighted sequences. The sequence parameters were as follows: T1-weighted imaging (T1WI), repetition time (TR)/echo time (TE)=250/2.67 ms, slice thickness=5 mm, field of view (FOV)=230×230 mm; T2-weighted imaging (T2WI), TR/TE=4,900/96 ms, SL=5 mm, FOV=230×230 mm; DWI-MRI: TR=6,600 ms, TE=100 ms, b=0, 500, 1,000 sec/mm2, slice thickness=5 mm. DCE-MRI was performed as follows: Two sets of T1-weighted images were scanned with the T1-vibe sequence [TR/TE=5.08/1.74 ms, FOV=260×260 mm, matrix=138×192, slice thickness=5 mm, flip angle (FA)=2° and 15°] and subsequently 75 consecutive scans were performed using the T1-twist sequence (TR/TE=4.82/1.88 ms, matrix=138×192, slice thickness=3.6 mm, FOV=260×260 mm, FA=12°) at 5.3 sec intervals. At the 6th phase, 0.1 mmol/kg gadolinium contrast (Ominscan, GE Healthcare) agent was injected via the elbow vein at a rate of 4 ml/sec.
ADC maps were calculated automatically using a Siemens syngo MR Workstation (version VE36A; Siemens AG) based on DWI-MRI scanning. Subsequently, the ADC value of the tumor was calculated using the hot-spot method (22). A total of five regions of interest (ROIs) with lower ADC values were selected in the tumor area and the ADC values of the contralateral healthy brain tissues were measured. The relative apparent diffusion coefficient (rADC) values were calculated from the ratio of the tumor area to the healthy brain tissue area. The rADC value of the tumor was represented by the average rADC value of the five ROIs.
The DCE-MRI data were imported into a GE workstation and OmniKinetics software (version 2.0; GE Healthcare) was used for analysis. An Extend-Tofts model was selected as the hemodynamic model (23). The arterial input function (AIF) was calculated by placing an ROI on the middle cerebral artery and the time and signal intensity curve of the brain functions were obtained from the AIF. Subsequently, the software estimated the Ktrans map. Five ROIs with higher Ktrans values were selected in the tumor area and the Ktrans value of the tumor was represented by the average Ktrans value of the five ROIs. The MRI data were analyzed by two experienced researchers.
Primary glioma stem-cell spheres culture
Fresh glioma tissue from the ~1 mm3 pieces were digested in papain (Worthington Biochemical Corporation) at 37°C for ~15 min, filtered through a 200 µm filter and centrifuged at 300 × g for 3 min at room temperature. The supernatant was discarded and the cells were resuspended in DMEM/F-12 supplemented with N-2, B-27 (all from Gibco; Thermo Fisher Scientific, Inc.), epidermal growth factor (20 ng/ml; Sigma-Aldrich Merck KGaA) and basic fibroblast growth factor (20 ng/ml; PeproTech, Inc.) and cultured in an incubator with 5% CO2 at 37°C (24).
Establishment of orthotopic xenograft glioma models
Xenografts were established in the right basal ganglia of NOD-SCID nude mice. The glioma stem cell spheres were digested with trypsin (Gibco; Thermo Fisher Scientific, Inc.) for 3 min and the supernatant was discarded by centrifugation. The pellet was resuspended in PBS to a density of ~1×104 cells/ml. Following anesthesia with 5% chloral hydrate (300 mg/kg), a total 5 µl cell suspension was aspirated with a micro-injector and the needle was vertically inserted at 1.8 mm posterior and 2.2 mm to the right of the intersection between the midline and the posterior canthus line of the brain in the NOD-SCID nude mice. The needle was initially inserted to a depth of ~3.5 mm and withdrawn to 0.5 mm depth. The cell suspension was slowly injected (at ~1 µl/min) and the needle was withdrawn following ~10 min of cell transfer. Glioma stem cell spheres form each human glioma tissue were implanted into 5 NOD-SCID nude mice. In total, 35 mice were used in the present study.
Magnetic resonance scanning and post-processing of xenografts
A Bruker 7.0 T MRI scanner for small animals (BioSpec 70/20 USR; Bruker Corporation) was used and MRI was performed during the later stages of xenograft growth. After anesthesia with isoflurane (3% for induction and 1.5% for maintenance), tumor bearing mice were fixed in a flat position and scanned in the later phases of tumor growth. The MRI scanning included coronal T2WI, sagittal T1WI, T1WI contrast enhanced, DWI-MRI and DCE-MRI. The sequence parameter settings for T2W1 were as follows: Turbo-RARE sequence, repetition time/echo time=4,000 ms/45 ms, FOV=25×25 mm, matrix sizes=256×256, slice thicknesses=0.5 mm. Similarly for T1WI, the following parameter settings were used: TR/TE=600 ms/14 ms, FOV=25×25 mm, slice thicknesses=0.5 mm. For DWI, the parameter settings were as follows: TR/TE=3,000 ms/50 ms, FOV=35×35 mm, slice thicknesses=0.5 mm, b=0, 500, 1,000 sec/mm2. Finally, for DCE-MRI the FLASH sequence was used with a repetition time/echo time of 25.0 ms/1.8 ms. In addition, the following settings were used: FOV=25×25 mm, matrix sizes=128×128, slice thicknesses=0.5 mm, slices=5, and FA=5°/15°/20°/30°. FAs of 5°, 15°, 20° and 30° were used to perform pre-contrast scans and subsequently 100 consecutive scans were performed with an FA of 15°. At the 4th phase, 0.1 mmol/kg gadolinium contrast agent was administered via tail-vein injection manually within 3 sec.
ADC maps were calculated automatically using Bruker image display and processing software (Paravision version 6.0.1; Bruker Corporation) based on DWI-MRI scanning. A total of five ROIs with lower ADC values were selected in the tumor area and the ADC values of the contralateral healthy brain tissues were measured. The rADC values were calculated from the ratio of the tumor area and the healthy brain tissue. The rADC value of the tumor was represented by the average rADC value of the five ROIs.
The DCE-MRI data were processed following import into OmniKinetics. The Ktrans maps were calculated following a ‘reference region’ model proposed by Cárdenas-Rodríguez et al (25), a total of five ROIs with higher Ktrans values were selected in the tumor area and the Ktrans value of the tumor was represented by the average Ktrans values of these five ROIs. The MRI data were analyzed by two experienced radiologist.
Immunohistochemical staining and blood vessel quantification
Hematoxylin and eosin (H&E) and immunohistochemical staining were performed on surgical specimens and on the corresponding xenograft samples following paraffin embedding, as described previously (26). The antibodies used were raised in rabbits against human CD34 (1:30; cat. no. ab81289; Abcam). The serial sections were prepared at 2 µm thickness and were used for immunohistochemical staining following dewaxing in xylene. Antigen retrieval was performed in a boiling EDTA solution (pH 9.0) for 2.5 min. The sections were washed with PBS following cooling. H2O2 (10%) and goat serum (Beyotime Institute of Biotechnology) were used to block endogenous peroxidase activity and nonspecific antigens, respectively. Each slice was incubated overnight with the corresponding primary antibody at 4°C. The specimens were washed with PBS and incubated with horseradish peroxidase-conjugated goat anti-rabbit secondary antibodies at 37°C for 30 min. 3, 3′-diaminobenzidine was used to visualize the antigen signal.
A total of five ROIs were selected using the hot-spot method. The images were visualized by light microscopy with ×200 magnification. The number, diameters and areas of the CD34-positive lumens were measured, and the average values were used as the tumor microvascular density, diameter and area, respectively. All pathological data for the tissues were measured by two highly experienced staff members who were blinded to the experimental groups.
Transcriptome sequencing and screening of differentially expressed genes
The original tumors (patient tumors 1, 2 and 3) and the corresponding xenografts (xenografts 1, 2 and 3) were collected for transcriptome sequencing (Wuhan Seqhealth). The differences in mRNA expression levels between the original tumors and the xenografts were compared. Total RNA was extracted from the glioma tissues using TRIzol® reagent (Invitrogen; Thermo Fisher Scientific, Inc.). Following removal of the ribosomal RNA and double-stranded RNA, the mRNA was reverse-transcribed into double-stranded cDNA. Polymerase chain reaction (PCR) was performed to amplify and establish the RNA library, which was assessed for nucleotide purity. Agarose gel electrophoresis was used to exclude severely degraded nucleic acid samples, and subsequently, the concentration of nucleic acids was measured using Qubit 2.0 (Thermo Fisher Scientific, Inc.). Samples with a concentration >200 ng/µl and a total quantity >0.8 mg were considered as suitable samples. The RNA library was sequenced on an Illumina sequencer (Illumina, Inc.). Gene expression levels were determined by several reads per kilobase per million reads and further processed with sample biological repeat correlation testing. Differentially expressed genes were screened between xenografts and their corresponding original tumors (fold change >2; P<0.05). Gene Ontology (GO) (27,28) analysis was performed to analyze the functions of the differentially expressed genes.
Statistical analysis
SPSS version 19.0 (IBM, Corp.) was used for statistical analysis. A paired t-test was used to compare differences of rADC, microvessel density, microvessel area and diameter values between original tumors and the corresponding xenografts. A Wilcoxon signed-rank test was used to compare differences of Ktrans values between the original tumors and corresponding xenografts. MRI data and pathological result reproducibility were assessed using intraclass correlation coefficient (ICC). P<0.05 was considered to indicate a statistically significant difference.
Results
Differences in MRI features between xenografts and original tumors
The 7 glioma patients enrolled in the present study included 6 glioblastoma cases (patients 1, 2, 3, 4, 6 and 7) and 1 anaplastic astrocytoma patient (patient-5) (Table I). Glioma stem cell spheres were extracted from the surgical specimens of the patients (Fig. 1), and the orthotopic glioma xenograft model was successfully established in all NOD-SCID nude mice. The growth pattern of the xenografts were divided into two categories. The first category included 6 cases of tumor with diffuse growth (xenografts 1, 2, 3, 4, 5 and 6), with 5 mice per group. The second category was for the one tumor case with nodular growth (xenograft 7; n=5 mice).
The differences in the MRI features between xenografts and original tumors are described in Table II. The original tumor samples did not have clear tumor boundaries or evidence of edema around the tumor mass. However, certain tumor specimens (patients 3 and 7) possessed a boundary between the tumor and the normal brain tissue in certain regions. The intra-tumoral signals were heterogeneous and multiple necrosis and cystic degeneration were evident. DWI indicated significant high signal intensity in the tumor area region (b=1,000 sec/mm2). Following gadolinium contrast enhancement, marked annular contrast enhancement was observed. The tumor area indicated apparent annular high signal intensity as determined by the Ktrans map (Fig. 2).
The most significant difference noted in the MRI features between the 6 cases of diffusely grown xenografts and the original tumors was the mild enhancement occurring in the local area of the xenografts. The ktrans value of the xenografts was significantly lower compared with the original tumors. In addition, the internal signal of the tumor was homogeneous in the absence of edema (Fig. 2). This finding was different when compared with the corresponding signal noted in the original tumors (Fig. 2). A clear demarcation between the xenografts and the normal brain tissue was noted in only one case of tumor nodular growth between the two groups (xenografts and human tumor). This was the major difference in the imaging characteristics between these two groups. In addition, the enhancement degree of the xenografts and the Ktrans value of the tumor area were significantly lower compared with the original tumors (Fig. 3). The Ktrans values of all the xenografts were lower compared with the corresponding values of the original tumors, and the rADC values of all the xenograft samples were higher compared with the corresponding values of the original tumors (P=0.016 and P=0.001, respectively; Figs. 2 and 3; Table III). The measurement results were determined using the ICC test, a measure of consistency of results, and the ICC value was 0.962, suggesting the consistency was good.
Among the 6 cases of orthotopic glioma xenograft models with diffuse growth, xenograft-5 was derived from a case of WHO grade III anaplastic astrocytoma, and the rest were derived from glioblastoma. Xenograft 5 showed diffuse growth with a homogeneous internal signal, mild enhancement present in the local area and almost no high signal on the Ktrans map, which were the same as the other xenografts with diffuse growth (Fig. 2). The rADC values of xenograft-5 (0.948±0.033) were not significantly different from those of other xenografts (0.937±0.055) with diffuse growth (P=0.301).
Differences in histopathological features between xenografts and original tumors
H&E staining of the xenografts and human tumor tissues indicated that the boundary of the xenograft tissues was clear, whereas that of the patient tumor was unclear. An example is shown for patient-7 and the corresponding xenograft, where the patient exhibited nodular growth (Fig. 4). However, the tumor boundary was not clear in xenografts with diffuse growth and the corresponding original tumors (Fig. S1). CD34 staining showed that the microvessel area and diameter of the 6 ×enograft cases that exhibited diffuse growth were significantly lower compared with the patient tumors (P=0.009 and P=0.007, respectively). There were no significant differences in the microvessel density between the xenografts and the patient tumors (Fig. 5). These findings were verified using an ICC test, with an ICC value of 0.955.
Differences in gene expression between xenografts and the corresponding original tumors
The differences in gene expression of the samples from patients 1, 2 and 3, and the corresponding xenografts are presented in Fig. 6. The black dots between the blue lines represent genes with expression differences <2-fold and the red dots represent genes with differences in expression >2-fold. The red dots above the blue lines represent genes with higher expression in the original tumors compared with the xenografts, whereas the red dots below the blue lines represent genes with lower expression in the original tumors compared with the xenografts. Significant differences were noted in the gene expression levels between primary tumors and xenografts.
GO analysis of the differentially expressed genes revealed that tumor cell characteristics and extracellular matrix-associated genes (cell activation, cell adhesion, cell migration, cell motility and extracellular matrix associated genes), angiogenesis-associated genes (angiogenesis and vasculature development) and immune-associated genes (immune response, immune system process and immune effector process) were highly expressed in the original tumors. The expression levels of the genes that were involved in cell cycle and nuclear division were increased in the xenografts (Figs. 7–9).
Discussion
PDX glioma models are important platforms for assessing the pre-clinical characteristics of tumors. Patient-derived glioblastoma xenograft models are a reliable translational platform that can recapitulate histopathological properties and maintain the genomic characteristics of parental tumors in situ (29). PDX adamantinomatous craniopharyngioma models recapitulate the radiological features of the original tumors (30).
In the present study, the MRI features of high-grade gliomas and of the corresponding xenografts were considerably different. The primary differences observed in the MRI features between the 6 cases of diffusely grown xenografts and the corresponding original tumors were a mild enhancement in the local area of the xenografts and homogeneous internal signal, and the Ktrans values of the xenografts were significantly lower compared with the original tumors. CD34 staining further demonstrated that the microvessel area and diameter of the 6 cases of diffusely grown xenografts were significantly lower compared with the original patient tumors, consistent with the characteristics of MRI. The MRI characteristics of the nodular xenograft growth samples were compared with those of the corresponding original tumors. A clear demarcation between the xenograft and the normal brain tissues was noted. H&E staining of the nodular xenograft portion and of the original patient tumor indicated that the boundary of the xenograft was clear, whereas in the original patient tumor, the boundaries were unclear. Although there was only one case with nodular growth, it was reported that gliomas had nodular growth in mice models and had relatively clear boundaries with normal brain tissue (31–33). These results show there were notable differences in the MRI characteristics between patient-derived orthotopic xenograft models and the corresponding original tumors.
The MRI features are closely associated with gene expression. Transcriptome sequencing of the original tumors and their corresponding xenografts revealed significant differences in gene expression. GO analysis of the differentially expressed genes indicated that the expression levels of the immune-associated genes, angiogenesis-associated genes, tumor cell characteristics and extracellular matrix-associated genes were significantly increased in the original tumors. Since certain mesenchymal components in the growth process of xenografts were derived from NOD-SCID nude mice (34,35), the expression levels of immune-associated genes were decreased in the xenografts. The contrast enhancement and increased Ktrans value indicated that the original tumors exhibited significant angiogenic activity and high vascular permeability (36), which may be attributed to the increased expression levels of the angiogenesis-associated genes in the original tumors (37–39). The rADC values of the original tumors were significantly lower compared with the xenografts, which may be attributed with the higher expression levels of the cell adhesion and extracellular matrix-associated genes noted in the original tumors, which in turn resulted in a higher cell density (40,41). Therefore, the differences noted in gene expression levels may underlie the differences noted in the MRI features between the original tumors and the corresponding xenografts.
Although PDX models can maintain the histopathological features and genotypes of the original tumors, the gene expression levels exhibit temporal and spatial heterogeneity and are affected by the tumor microenvironment (42–44). The expression levels of the genes varied according to the different stages of tumor growth and therefore the xenografts assessed may represent only a specific growth stage of the original patient tumor. This may also explain the potent antitumor efficacy of specific treatment strategies on xenografts which are not observed in subsequent human clinical trials (45,46). Therefore, it is particularly important to examine the original patient tumor growth stage when using xenograft models, or to use appropriate tumor models to examine the biological characteristics, therapeutic response and corresponding MRI biomarkers of these tumors.
The present study has certain limitations. The number of experimental samples was considerably low; thus glioma surgical specimens will continue to be collected to establish and assess more orthotopic xenografts, expanding the sample size, and thus providing additional experimental basis for comparing the similarities and differences between xenografts and the corresponding original tumors. Gene expression between xenografts with nodular growth and the corresponding original tumor should be compared. However, the surgical sample obtained from patient-7 was insufficient. After the extraction of primary tumor cells and histological analysis, the RNA extracted from the remaining tumor tissues failed to pass the quality test for establishment of an RNA library; therefore differences in the gene expression of patient-7 and xenograft-7 were not compared. However, there were significant differences in the MRI features between patient-7 and xenograft-7.
Since the tumor microenvironment of nude mice and patients varies, studying the expression differences of GSCs between xenografts and the corresponding original tumors has an important role in preclinical research of gliomas (47,48), for example, this may be the reason why some drugs have notable antitumor effects on animal models (49,50), but did not exhibit a desirable response in clinical trials (46,51), which will be one of the future directions of our lab. The lack of comparison between GSC providers is also one of the limitations of the present study. Analyzing the relationship between MRI characteristics and gene characteristics is of great significance for the accurate diagnosis and personalized treatment of gliomas. Thus, this will be taken into consideration in our future studies.
In summary, the present study demonstrated that patient-derived orthotopic xenograft glioma models in mice could not be used to replicate the MRI features of the original tumors by comparing conventional MRI, DWI-MRI and DCE-MRI characteristics of these two distinct groups. The differential expression of certain genes may underlie the differences observed in the MRI features between original tumors and the corresponding xenografts. Together, the results of the present study showed that MRI biomarkers obtained from PDXs should be interpreted with caution.
Supplementary Material
Supporting Data
Acknowledgements
Not applicable.
Funding
The present study was supported by the National Natural Science Foundation of China (grant nos. 81871421 and 81571660) and the Clinical Scientific Foundation of Institute of Surgery Research, Daping Hospital, at the Third Military Medical University (grant no. 2014YLC03).
Availability of data and materials
All data generated and/or analyzed during this study are available from the corresponding author on reasonable request.
Authors' contributions
WZ and XC conceived and designed the experiments. WX and JZ performed the experiments and wrote the first draft of the manuscript. BZ performed clinical case collection. YG performed MRI scanning. JF and SW performed MRI data post-processing and analysis. HT and TX performed the transcriptome sequencing.
Ethics approval and consent to participate
The present study was approved by the Ethics Committees of the Daping Hospital, at the Army Medical University (Chongqing, China). Written informed consent for participation was obtained from patients and/or their legal guardians.
Patient consent for publication
Written consent for publication was obtained from patients and/or their legal guardians.
Competing interests
The authors declare that they have no competing interests.
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