MicroRNA‑642a‑5p inhibits colon cancer cell migration and invasion by targeting collagen type I α1
Retraction in: /10.3892/or.2024.8795
- Authors:
- Published online on: December 18, 2020 https://doi.org/10.3892/or.2020.7905
- Pages: 933-944
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Copyright: © Wang et al. This is an open access article distributed under the terms of Creative Commons Attribution License.
Abstract
Introduction
Colon cancer usually occurs in people aged 40–50 years and is a common tumour of the digestive tract (1). According to the China Cancer Statistics Report, colon cancer is one of the most common tumours in China; the incidence of colon cancer was ~28/100,000 individuals in 2014, second only to lung cancer and gastric cancer (2,3). Survey statistics indicate that the incidence of colon cancer in young people (<45 years of age) is on the rise, posing a serious threat to human health (4). Although colon cancer detection techniques, surgical procedures and targeted drugs have benefited from major breakthroughs, the 5-year survival rate of patients with colon cancer remains unsatisfactory (~50%) (5). At the time of diagnosis, >50% of patients with colon cancer present with distant metastases, which is an important factor leading to a poor prognosis (6–8). Therefore, studying the molecular mechanism of colon cancer metastasis is of great importance.
MicroRNAs (miRNAs/miRs) are small-molecule non-coding RNAs consisting of 22–25 nucleotides encoded by an endogenous gene (9). miRNAs are mainly involved in posttranscriptional gene expression regulation and can directly bind to mRNAs by complementing their 3′-untranslated region (UTR) (10). This function of miRNAs causes mRNA degradation or inhibition of translation, thereby downregulating the expression of target genes and exerting their biological functions. miRNAs are involved in tumorigenesis, recurrence, metastasis and drug resistance, and they are increasingly being used as tumour biomarkers (11–14).
miR-642a-5p is a newly discovered tumour-associated miRNA. Paydas et al (15) revealed that miR-642a-5p is significantly downregulated in Hodgkin lymphoma and may be involved in the regulation of recurrence and development. However, the association between miR-642a-5p and clinical prognosis, and the mechanism by which it regulates colon cancer cell metastasis are unclear. The present study mainly analysed the clinical significance of miR-642a-5p in colon cancer and its mechanism of regulating colon cancer by targeting collagen type I α1 (COL1A1).
Materials and methods
Bioinformatics analysis
Gene expression quantification data of normal colon tissues (41 cases) and colon cancer tissues (abbreviated as COAD; 471 cases) were downloaded from The Cancer Genome Atlas (TCGA) database (https://portal.gdc.cancer.gov/). starBase (http://starbase.sysu.edu.cn/index.php) was used to predict the target genes of miR-642a-5p. The expression characteristics of COL1A1 in patients with colon cancer were analysed via Gene Expression Profiling Interactive Analysis (http://gepia.cancer-pku.cn/index.html).
Clinical research
Cancer and adjacent normal tissue samples (>5 cm from tumour) were collected from 100 patients with colon cancer between April 2015 and April 2017 from The Second Affiliated Hospital of Jiaxing University (Jiaxing, China). The patients had a median age of 47 years (range, 28–74 years). As inclusion criteria, the patients had to be diagnosed with colon cancer by pathological diagnosis and had to be aged between 20 and 75 years. Patients were excluded if they suffered from other malignant tumours or if they had been treated with radiotherapy or chemotherapy within 3 months before enrolment. The 5-year survival rate of patients was analysed. Written informed consent was obtained from the patients, and the protocol for obtaining human samples was approved by the Ethics Committee of The Second Affiliated Hospital of Jiaxing University Hospital (approval no. JXDY-2018-0024A; Jiaxing, China).
Cell culture and transfection
The colon cancer cell lines DLD-1 and SW620 were obtained from the American Type Culture Collection (ATCC) and were cultured in RPMI-1640 medium (Thermo Fisher Scientific, Inc.) containing 10% FBS (Thermo Fisher Scientific, Inc.), 50 U/ml penicillin and 50 µg/ml streptomycin (cat. no. 15070063; Thermo Fisher Scientific, Inc.) at 37°C under 5% CO2. Transfection was used to overexpress (OE) miR-642a-5p and COL1A1. Briefly, 2 µl Lipofectamine® 2000 (Invitrogen; Thermo Fisher Scientific, Inc.), 40 pmol miR-642a-5p mimic (5′-UUCUCCGAACGUGUCACGUUU-3′) or scrambled mimic negative control (NC) (5′-GUCCCUCUCCAAAUGUGUCUUG-3′), and 1 µg/ml COL1A1 overexpression (OE-COL1A1) plasmid or empty plasmid (NC) (Shanghai GenePharma Co., Ltd.) were mixed in 50 µl serum-free medium at room temperature for 15 min. The lipid compounds were diluted in 300 µl serum-free medium and 600 µl medium containing FBS to produce a 1-ml volume mixture and incubated with the cells at 37°C with 5% CO2 for subsequent experiments. After 24 h, the cells were collected for subsequent experiments.
Reverse transcription-quantitative (q)PCR
Total RNA was extracted from cells or tissues using TRIzol® (Invitrogen; Thermo Fisher Scientific, Inc.). The concentration and purity of RNA were examined using a NanoDrop 2000 spectrophotometer (NanoDrop Technologies; Thermo Fisher Scientific, Inc.). RNA (1 µg) was reverse transcribed using a cDNA Reverse Transcription kit (cat. no. 4368813; Thermo Fisher Scientific, Inc.) for the synthesis of cDNA (42°C for 60 min, 70°C for 5 min and then kept at 4°C). SYBR-Green PCR Master Mix (Roche Diagnostics) was used to conduct qPCR experiments using a PCR Detection System (ABI 7500; Thermo Fisher Scientific, Inc.). The PCR cycle was as follows: Pretreatment at 95°C for 10 min, followed by 40 cycles at 94°C for 15 sec and 60°C for 1 min, and finally 4°C for preservation. A comparative cycle threshold (2−ΔΔCq method) was employed to analyse RNA expression (16). GAPDH and U6 expression was used for normalization of mRNA and miRNA, respectively. The primer sequences are listed in Table I.
Dual-luciferase reporter assay
Wild-type COL1A1 (COL1A1-Wt), mutated COL1A1 (COL1A1-Mut), miR-642a-5p NC and mimic were cloned into pMIR-REPORT Luciferase vectors (Ambion; Thermo Fisher Scientific, Inc.). 293T cells (ATCC; cat. no. CRL-11268) were seeded in 6-well plates (in RPMI-1640 medium containing 10% FBS, 50 U/ml penicillin and 50 µg/ml streptomycin under 5% CO2) and then transfected with both vectors (COL1A1-Wt or COL1A1-mut, miR-642-5p NC or mimic) using Lipofectamine 2000 for 24 h at 37°C. Subsequently, the Dual-Luciferase Reporter 1000 Assay System (Promega Corporation) was used to evaluate luciferase activity, which was compared with Renilla luciferase activity.
Cell counting Kit-8 (CCK-8) assay
The DLD-1 and SW620 cells were adjusted to a density of 2×104 cells/ml and inoculated in 96-well plates (100 µl/well). At 48 h after transfection, 10 µl CCK-8 reagent (Beyotime Institute of Biotechnology) was added, and the cells were incubated at 37°C for 2 h. The optical density (OD) at 450 nm was measured using a microplate reader (Infinite M200 Microplate reader; Tecan Group, Ltd.) to calculate relative cell viability.
Wound healing assay
The cells were collected and seeded in a 6-well plate (1×106 cells/well) and cultured with serum-free medium until 90% confluence. Monolayers of cells were scratched from top to bottom using a 200-µl pipette tip. Monolayers were then washed with PBS to remove cellular debris and further cultured for the next 24 h at 37°C. Images of monolayers were captured under an optical light microscope (magnification, ×100; IX71; Olympus Corporation) following wounding. Based on the initial scratch width, the percentages of the migration distance of the leading edge of the scratch were calculated.
Transwell assay
Cells (3×104) were transferred to the upper chamber of a Transwell apparatus (8-µm; BD Biosciences) in serum-free medium. Before inoculating the cells, Matrigel (BD Biosciences) was diluted (1:8) and added to the upper chamber for 30 min at 37°C. As a chemoattractant, the bottom chamber was filled with complete medium supplemented with 10% FBS. After 48 h of incubation at 37°C, the cells that did not invade through the membrane were removed. The cells were then fixed with 20% methanol at room temperature and stained with 0.2% crystal violet at 37°C for ~30 min. The cells invading the bottom chamber per field were counted under an optical light microscope (magnification, ×400; IX71; Olympus Corporation).
Western blotting
The total proteins from cells or tissues were extracted using RIPA lysis buffer (Sigma-Aldrich; Merck KGaA). A BCA kit was used to analyse the protein concentration. Proteins (30 µg/lane) were separated via 10% SDS-PAGE at 110 V for 100 min and transferred to PVDF membranes at 90 V for 90 min. The PVDF membrane was blocked with 5% skimmed milk for 1 h at room temperature. Primary antibodies (all Abcam) against COL1A1 (cat. no. ab34710), vimentin (cat. no. ab92547), N-cadherin (cat. no. ab18203), E-cadherin (cat. no. ab40772) and GAPDH (cat. no. ab8245) were diluted 1:1,000 with 5% BSA (cat. no. SW3015; Beijing Solarbio Science & Technology Co., Ltd.) and added to the PVDF membranes overnight at 4°C. Subsequently, HRP-conjugated secondary antibodies (cat. nos. sc-516102 and sc-2357; Santa Cruz Biotechnology, Inc.) were diluted 1:5,000 and added to the PVDF membranes at room temperature for 2 h. The protein bands were detected using Pierce™ ECL plus Western blotting substrate (Thermo Fisher Scientific, Inc.) in ChemiDoc MP (Bio-Rad Laboratories, Inc.). ImageJ v1.8.0 software (National Institutes of Health) was used to analyse the gray value of the target band.
Statistical analysis
Three repeats were performed. All the statistical analyses were performed using GraphPad Prism 7 (GraphPad Software, Inc.). All the experimental data are presented as the mean ± SD. For the bioinformatics analysis, the differentially expressed genes in normal colon and colon cancer tissues were screened using the edgeR package (17), and the differential expression conditions were set as follows: Log |fold-change (FC)| >2 and P<0.01. Pearson's correlation analysis was used to analyse the correlation between miR-642a-5p and COL1A1 expression in cancer tissues. Kaplan-Meier analysis was used for survival analysis. The survival curve was generated using GraphPad software with the log-rank (Mantel-Cox) test. Pearson χ2 test was used to analyse the categorical variables shown in the tables. Paired Student's t-test was used for comparison of data from the same source (normal versus cancer tissues). For the data from different patients and cells, unpaired Student's t-test was used. One-way ANOVA followed by Tukey's post-hoc test was used for analysis of multiple groups. P<0.05 was considered to indicate a statistically significant difference.
Results
miR-642a-5p expression is downregulated in colon cancer tissues
In TCGA database, the expression levels of miR-642a-5p were significantly downregulated in colon cancer tissues compared with in normal tissues (Fig. 1A). The overall survival rate of patients with colon cancer with low miR-642a-5p expression was lower than that of patients with high miR-642a-5p expression (Fig. 1B).
COL1A1 expression is upregulated in colon cancer tissues and is associated with a poor prognosis by bioinformatics analysis
A total of 4,101 differentially expressed genes were obtained by differential analysis. There were 2,482 potential target genes for miR-642a-5p in starBase. A total of 68 common target genes were obtained from the two sets (potential target genes for miR-642a-5p and differentially expressed genes) and displayed using a Venn diagram in Fig. 2A. According to Fig. 2B, COL1A1 was the gene with the highest expression level and was therefore selected for further study, revealing that COL1A1 expression was significantly upregulated in colon cancer tissues compared with in normal tissues (Fig. 2C). Higher expression levels of COL1A1 were associated with higher stages of colon cancer (Fig. 2D). In addition, high COL1A1 expression predicted a worse disease-free survival compared with low COL1A1 expression (Fig. 2E).
miR-642a-5p directly targets COL1A1
The site of miR-642a-5p targeting COL1A1 is shown in Fig. 3A. After transfection with the miR-642a-5p mimic, miR-642a-5p expression was significantly increased (Fig. 3B). After transfection with the miR-642a-5p mimic and the COL1A1-Wt plasmid, luciferase activity was significantly decreased compared with transfection with the mimic-NC (Fig. 3C). This demonstrated that miR-642a-5p directly targeted COL1A1.
miR-642a-5p and COL1A1 are associated with prognosis in patients with colon cancer
By examining clinically collected colon cancer tissues from patients, it was revealed that the expression levels of miR-642a-5p in cancer tissues were significantly lower than those in adjacent normal tissues (Fig. 4A), while the expression levels of COL1A1 in cancer tissues were significantly upregulated compared with those in normal tissues (Fig. 4B). Additionally, miR-642a-5p and COL1A1 expression was negatively correlated in cancer tissues (Fig. 4C). If the binding of a miRNA and its target mRNA induces mRNA degradation or translation inhibition, this indicates that miRNA expression will be inversely associated with mRNA expression. This result further validated the targeting association of miR-642a-5p and COL1A1. Survival analysis demonstrated that patients with low miR-642a-5p expression or high COL1A1 expression had lower survival rates (Fig. 4D and E). Further analysis revealed that miR-642a-5p and COL1A1 expression was significantly associated with tumour stage, lymph node invasion and distant metastasis (Tables II and III). The present findings suggested that miR-642a-5p may have suppressive roles in colon cancer, while COL1A1 may have cancer-promoting effects. Therefore, miR-642a-5p may be involved in the metastasis of colon cancer by targeting COL1A1.
Table II.Association between clinicopathological characteristics and miR-642a-5p expression in 100 patients with colon cancer. |
Table III.Association between clinicopathological characteristics and COL1A1 expression in 100 patients with colon cancer. |
miR-642a-5p inhibits colon cancer cell viability by targeting COL1A1
To further analyse the effects and regulatory mechanism of miR-642a-5p on colon cancer cells, DLD-1 and SW620 cells were divided into 4 groups, namely, OE-NC + mimic-NC, OE-NC + mimic-miR-642a-5p, OE-COL1A1 + mimic-miR-642a-5p and OE-COL1A1 + mimic-NC. In DLD-1 cells, COL1A1 expression was significantly increased following transfection with OE-COL1A1 (Fig. 5A). miR-642a-5p expression of the OE-NC + mimic-miR-642a-5p and OE-COL1A1 + mimic-miR-642a-5p groups was significantly higher than that of the OE-NC + mimic-NC group, while miR-642-5p expression in the OE-COL1A1 + mimic-NC group was significantly lower than that in the OE-NC + mimic-NC group (Fig. 5B). This result suggested that the transfection experiment was successful. The mRNA and protein levels of COL1A1 in the OE-NC + mimic-miR-642a-5p group were significantly lower than those in the OE-NC + mimic-NC group, while COL1A1 expression in the OE-COL1A1 + mimic-miR-642a-5p group was significantly higher than that in the OE-NC + mimic-miR-642a-5p group (Fig. 5B and C). This result indicated that overexpression of miR-642a-5p inhibited COL1A1 expression, whereas overexpression of COL1A1 reversed the inhibitory effects of miR-642a-5p on COL1A1 expression. Further experimental results revealed that overexpression of miR-642a-5p caused a significant decrease in cell viability (Fig. 5D). Overexpression of COL1A1 promoted cell viability and partially reversed the inhibition of cell viability induced by miR-642a-5p (Fig. 5D). The same trends were observed in SW620 cells (Fig. 5E-H). These results indicated that miR-642a-5p inhibited the cell viability of colon cancer cells by inhibiting COL1A1 expression.
miR-642a-5p inhibits colon cancer cell migration and invasion by targeting COL1A1
To further analyse the effects of miR-642a-5p and COL1A1 on colon cancer cell migration and invasion, the migratory and invasive abilities of each group were examined. The results revealed that overexpression of miR-642a-5p in DLD-1 cells significantly inhibited cell migration and invasion compared with the OE-NC + mimic-NC group. Overexpression of COL1A1 significantly promoted the migration and invasion of DLD-1 cells and partially reversed the inhibitory effects of miR-642a-5p on migration and invasion (Fig. 6A and B). Similar effects were observed in SW620 cells (Fig. 6C and D). These results suggested that miR-642a-5p inhibited cell migration and invasion by targeting COL1A1.
miR-642a-5p inhibits epithelial mesenchymal transition (EMT) via COL1A1
In both DLD-1 and SW620 cells, vimentin and N-cadherin mRNA and protein expression was significantly downregulated, while E-cadherin expression was significantly upregulated in the OE-NC + mimic-miR-642a-5p group compared with the OE-NC + mimic-NC group. Vimentin and N-cadherin mRNA and protein expression was upregulated, and E-cadherin expression was downregulated in the OE-COL1A1 + mimic-NC group compared with the OE-NC + mimic-NC group. In addition, overexpressing COL1A1 partially reversed the effects of miR-642a-5p on EMT-associated proteins (Fig. 7A-D). These results indicated that miR-642a-5p inhibited EMT via COL1A1.
Discussion
The present study discovered the roles of miR-642a-5p and COL1A1 in colon cancer and analysed the mechanism by which miR-642a-5p may regulate the migration, invasion and EMT of colon cancer cells by targeting COL1A1.
The role of miRNAs in colon cancer has been previously described; for example, miR-223, miR-378 and miR-20b participate in the occurrence, development, metastasis and drug resistance of colon cancer by targeting the expression levels of target genes (18–20). Daniunaite et al (21) revealed that promoter methylation of miR-642a in patients with prostate cancer leads to a decrease in miR-642a expression, which may be associated with the occurrence of prostate cancer. Low miR-642a-5p expression can be used as a biomarker for the diagnosis of osteosarcoma in Mexican populations (22). However, Marchionni et al (23) demonstrated that miR-642a-5p is significantly overexpressed in renal cell carcinoma. In addition, miR-642a-5p can inhibit the proliferation of colon cancer cells by targeting serine hydroxyl methyltransferase 2 (24). The results of the present study revealed that miR-642a-5p expression was downregulated in patients with colon cancer, and low miR-642a-5p expression predicted a worse survival, although the difference was not significant. In addition, further experiments demonstrated that overexpression of miR-642a-5p inhibited the migration and invasion of colon cancer cells. The current results suggested that the low expression profile of miR-642a-5p may be involved in the metastasis of colon cancer and affect the prognosis.
To further analyse the mechanism by which miR-642a-5p regulated the migration and invasion of colon cancer cells, 4,101 genes were obtained that were significantly upregulated in colon cancer by bioinformatics analysis and 2,482 genes were predicted to be potential target mRNAs of miR-642-5p. As a result, it was found that COL1A1 was a target gene of miR-642a-5p and was highly expressed in colon cancer. The results of the present study revealed that COL1A1 expression was upregulated in colon cancer and negatively correlated with miR-642a-5p. The survival rate of patients with colon cancer with high levels of COL1A1 was lower compared with that of patients with low levels. Dual-luciferase reporter assays and cell experiments confirmed that miR-642a-5p directly targeted COL1A1 mRNA and protein expression. In addition, subsequent experiments demonstrated that miR-642a-5p inhibited the migration and invasion of colon cancer cells by inhibiting COL1A1 expression. Type I collagen is the main component of the extracellular matrix and it serves a role in regulating tumour metastasis (25). The COL1A1 gene encodes a pro-α1 chain of type I collagen (26). Recent studies have demonstrated the role of COL1A1 in cervical cancer, breast cancer and hepatocellular carcinoma, including promoting proliferation, inhibiting apoptosis, promoting metastasis and inducing cell stemness (27–29). However, there is limited research on COL1A1 in colon cancer. A recent study has demonstrated that COL1A1 is overexpressed in colon cancer and may be a driving gene for colon cancer progression (30). Zhang et al (31) revealed that COL1A1 promotes metastasis of colorectal cancer by regulating the WNT/planar cell polarity signalling pathway. The results of the present study confirmed that miR-642a-5p inhibited the migration and invasion of colon cancer cells by downregulating COL1A1 expression.
EMT can cause cells to lose their epithelial phenotype and to acquire important characteristics of migration and drug resistance (32–34). E-cadherin maintains tight junctions between cells, preventing cell invasion and metastasis (35). Vimentin and N-cadherin are markers of the loss of epithelial characteristics of cells and their transformation into mesenchymal features (36,37). During EMT, E-cadherin expression is downregulated, and vimentin and N-cadherin expression is upregulated (38). The results of the present study revealed that miR-642a-5p inhibited the EMT process of colon cancer cells by targeting COL1A1. Liu et al (39) found that COL1A1 regulates metastasis of TGF-β1-induced EMT processes. Additionally, COL1A1 promotes EMT-induced metastasis of hepatoma cells (40). The present results indicated that miR-642a-5p regulated the EMT process of colon cancer cells by targeting COL1A1.
The present study used cell experiments to analyse the mechanism by which miR-642a-5p regulated EMT in colon cancer by targeting COL1A1. However, the role of miR-642a-5p/COL1A1 in colon cancer requires further in vivo verification. In addition, the effects of miR-642a-5p and COL1A1 on the genome should be further studied in the future.
In conclusion, miR-642a-5p inhibited colon cancer cell EMT by regulating COL1A1 and inhibited cell migration and invasion. This may be one of the mechanisms affecting the prognosis of patients with colon cancer. However, the mechanism by which miR-642a-5p regulates EMT by targeting COL1A1 requires further investigation.
Acknowledgements
The authors would like to thank Dr Pengfei Yu (Department of Abdominal Surgery, Zhejiang Cancer Hospital, Hangzhou, China) for the writing assistance.
Funding
The present study was supported by the Science and Technology Planning Project of Jiaxing City (grant no. 2018AY32002) and the Medical Health Science and Technology Program of Zhejiang Province (grant no. 2021KY354).
Availability of data and materials
All data generated or analyzed during this study are included in this published article.
Authors' contributions
CC conceived the project and revised the manuscript. XW and ZS performed the experiments and wrote the study. BH performed parts of the experiments. ZC and FC analyzed the data. All authors read and approved the final manuscript.
Ethics approval and consent to participate
Written informed consent was obtained from the patients, and the protocol for obtaining human samples was approved by the Ethics Committee of The Second Affiliated Hospital of Jiaxing University Hospital (approval no. JXDY-2018-0024A; Jiaxing, China).
Patient consent for publication
Not applicable.
Competing interests
The authors declare that they have no competing interests.
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