1
|
Smolen JS, Aletaha D, Koeller M, Weisman
MH and Emery P: New therapies for treatment of rheumatoid
arthritis. Lancet. 370:1861–1874. 2007. View Article : Google Scholar : PubMed/NCBI
|
2
|
McInnes IB and Schett G: The pathogenesis
of rheumatoid arthritis. N Engl J Med. 365:2205–2219. 2011.
View Article : Google Scholar : PubMed/NCBI
|
3
|
Djebali S, Davis CA, Merkel A, Dobin A,
Lassmann T, Mortazavi A, Tanzer A, Lagarde J, Lin W, Schlesinger F,
et al: Landscape of transcription in human cells. Nature.
489:101–108. 2012. View Article : Google Scholar : PubMed/NCBI
|
4
|
Mehler MF and Mattick JS: Noncoding RNAs
and RNA editing in brain development, functional diversification,
and neurological disease. Physiol Rev. 87:799–823. 2007. View Article : Google Scholar : PubMed/NCBI
|
5
|
Kapranov P, Cheng J, Dike S, Nix DA,
Duttagupta R, Willingham AT, Stadler PF, Hertel J, Hackermüller J,
Hofacker IL, et al: RNA maps reveal new RNA classes and a possible
function for pervasive transcription. Science. 316:1484–1488. 2007.
View Article : Google Scholar : PubMed/NCBI
|
6
|
Novikova IV, Hennelly SP and Sanbonmatsu
KY: Sizing up long non-coding RNAs: Do lncRNAs have secondary and
tertiary structure? Bioarchitecture. 2:189–199. 2012. View Article : Google Scholar : PubMed/NCBI
|
7
|
Kowalczyk MS, Higgs DR and Gingeras TR:
Molecular biology: RNA discrimination. Nature. 482:310–311. 2012.
View Article : Google Scholar : PubMed/NCBI
|
8
|
Long L, Yu P, Liu Y, Wang S, Li R, Shi J,
Zhang X, Li Y, Sun X, Zhou B, et al: Upregulated microRNA-155
expression in peripheral blood mononuclear cells and
fibroblast-like synoviocytes in rheumatoid arthritis. Clin Dev
Immunol. 2013:2961392013. View Article : Google Scholar : PubMed/NCBI
|
9
|
Pauley KM, Satoh M, Chan AL, Bubb MR,
Reeves WH and Chan EK: Upregulated miR-146a expression in
peripheral blood mononuclear cells from rheumatoid arthritis
patients. Arthritis Res Ther. 10:R1012008. View Article : Google Scholar : PubMed/NCBI
|
10
|
Dong L, Wang X, Tan J, Li H, Qian W, Chen
J, Chen Q, Wang J, Xu W, Tao C and Wang S: Decreased expression of
microRNA-21 correlates with the imbalance of Th17 and Treg cells in
patients with rheumatoid arthritis. J Cell Mol Med. 18:2213–2224.
2014. View Article : Google Scholar : PubMed/NCBI
|
11
|
Ponting CP, Oliver PL and Reik W:
Evolution and functions of long noncoding RNAs. Cell. 136:629–641.
2009. View Article : Google Scholar : PubMed/NCBI
|
12
|
Wang KC and Chang HY: Molecular mechanisms
of long noncoding RNAs. Mol Cell. 43:904–914. 2011. View Article : Google Scholar : PubMed/NCBI
|
13
|
Zhu J, Liu S, Ye F, Shen Y, Tie Y, Zhu J,
Jin Y, Zheng X, Wu Y and Fu H: The long noncoding RNA expression
profile of hepatocellular carcinoma identified by microarray
analysis. PLoS One. 9:e1017072014. View Article : Google Scholar : PubMed/NCBI
|
14
|
Wan ZY, Song F, Sun Z, Chen YF, Zhang WL,
Samartzis D, Ma CJ, Che L, Liu X, Ali MA, et al: Aberrantly
expressed long noncoding RNAs in human intervertebral disc
degeneration: A microarray related study. Arthritis Res Ther.
16:4652014. View Article : Google Scholar : PubMed/NCBI
|
15
|
Yang B, Xia ZA, Zhong B, Xiong X, Sheng C,
Wang Y, Gong W, Cao Y, Wang Z and Peng W: Distinct hippocampal
expression profiles of long non-coding RNAs in an alzheimer's
disease model. Mol Neurobiol. 54:4833–4846. 2017. View Article : Google Scholar : PubMed/NCBI
|
16
|
Stuhlmüller B, Kunisch E, Franz J,
Martinez-Gamboa L, Hernandez MM, Pruss A, Ulbrich N, Erdmann VA,
Burmester GR and Kinne RW: Detection of oncofetal h19 RNA in
rheumatoid arthritis synovial tissue. Am J Pathol. 163:901–911.
2003. View Article : Google Scholar : PubMed/NCBI
|
17
|
Song J, Kim D, Han J, Kim Y, Lee M and Jin
EJ: PBMC and exosome-derived Hotair is a critical regulator and
potent marker for rheumatoid arthritis. Clin Exp Med. 15:121–126.
2015. View Article : Google Scholar : PubMed/NCBI
|
18
|
Spurlock CF III, Tossberg JT, Matlock BK,
Olsen NJ and Aune TM: Methotrexate inhibits NF-κB activity via long
intergenic (noncoding) RNA-p21 induction. Arthritis Rheumatol.
66:2947–2957. 2014. View Article : Google Scholar : PubMed/NCBI
|
19
|
Messemaker TC, Frank-Bertoncelj M, Marques
RB, Adriaans A, Bakker AM, Daha N, Gay S, Huizinga TW, Toes RE,
Mikkers HM and Kurreeman F: A novel long non-coding RNA in the
rheumatoid arthritis risk locus TRAF1-C5 influences C5 mRNA levels.
Genes Immun. 17:85–92. 2016. View Article : Google Scholar : PubMed/NCBI
|
20
|
Lu MC, Yu HC, Yu CL, Huang HB, Koo M, Tung
CH and Lai NS: Increased expression of long noncoding RNAs
LOC100652951 and LOC100506036 in T cells from patients with
rheumatoid arthritis facilitates the inflammatory responses.
Immunol Res. 64:576–583. 2016. View Article : Google Scholar : PubMed/NCBI
|
21
|
Arnett FC, Edworthy SM, Bloch DA, McShane
DJ, Fries JF, Cooper NS, Healey LA, Kaplan SR, Liang MH and Luthra
HS: The American Rheumatism Association 1987 revised criteria for
the classification of rheumatoid arthritis. Arthritis Rheum.
31:315–324. 1988. View Article : Google Scholar : PubMed/NCBI
|
22
|
Prevoo ML, van't Hof MA, Kuper HH, van
Leeuwen MA, van de Putte LB and van Riel PL: Modified disease
activity scores that include twenty-eight-joint counts. Development
and validation in a prospective longitudinal study of patients with
rheumatoid arthritis. Arthritis Rheum. 38:44–48. 1995. View Article : Google Scholar : PubMed/NCBI
|
23
|
Hashemi R, Majidi A, Motamed H, Amini A,
Najari F and Tabatabaey A: Erythrocyte sedimentation rate
measurement using as a rapid alternative to the westergren method.
Emerg (Tehran). 3:50–53. 2015.PubMed/NCBI
|
24
|
Zhang J, Cui X, Shen Y, Pang L, Zhang A,
Fu Z, Chen J, Guo X, Gan W and Ji C: Distinct expression profiles
of LncRNAs between brown adipose tissue and skeletal muscle.
Biochem Biophys Res Commun. 443:1028–1034. 2014. View Article : Google Scholar : PubMed/NCBI
|
25
|
Tian M, Chen R, Li T and Xiao B: Reduced
expression of circRNA hsa_circ_0003159 in gastric cancer and its
clinical significance. J Clin Lab Anal. Jun 15–2017.(Epub ahead of
print). doi: 10.1002/jcla.22281. View Article : Google Scholar
|
26
|
Xu G, Chen J, Pan Q, Huang K, Pan J, Zhang
W, Chen J, Yu F, Zhou T and Wang Y: Long noncoding RNA expression
profiles of lung adenocarcinoma ascertained by microarray analysis.
PLoS One. 9:e1040442014. View Article : Google Scholar : PubMed/NCBI
|
27
|
Tsai MC, Manor O, Wan Y, Mosammaparast N,
Wang JK, Lan F, Shi Y, Segal E and Chang HY: Long noncoding RNA as
modular scaffold of histone modification complexes. Science.
329:689–693. 2010. View Article : Google Scholar : PubMed/NCBI
|
28
|
Kanehisa M, Goto S, Furumichi M, Tanabe M
and Hirakawa M: KEGG for representation and analysis of molecular
networks involving diseases and drugs. Nucleic Acids Res.
38:D355–D360. 2010. View Article : Google Scholar : PubMed/NCBI
|
29
|
Zhang T, Jiang M, Chen L, Niu B and Cai Y:
Prediction of gene phenotypes based on GO and KEGG pathway
enrichment scores. Biomed Res Int. 2013:8707952013. View Article : Google Scholar : PubMed/NCBI
|
30
|
Ørom UA, Derrien T, Beringer M, Gumireddy
K, Gardini A, Bussotti G, Lai F, Zytnicki M, Notredame C, Huang Q,
et al: Long noncoding RNAs with enhancer-like function in human
cells. Cell. 143:46–58. 2010. View Article : Google Scholar : PubMed/NCBI
|
31
|
Teixeira VH, Olaso R, Martin-Magniette ML,
Lasbleiz S, Jacq L, Oliveira CR, Hilliquin P, Gut I, Cornelis F and
Petit-Teixeira E: Transcriptome analysis describing new immunity
and defense genes in peripheral blood mononuclear cells of
rheumatoid arthritis patients. PLoS One. 4:e68032009. View Article : Google Scholar : PubMed/NCBI
|
32
|
van der Pouw Kraan TC, Wijbrandts CA, van
Baarsen LG, Voskuyl AE, Rustenburg F, Baggen JM, Ibrahim SM, Fero
M, Dijkmans BA, Tak PP and Verweij CL: Rheumatoid arthritis
subtypes identified by genomic profiling of peripheral blood cells:
Assignment of a type I interferon signature in a subpopulation of
patients. Ann Rheum Dis. 66:1008–1014. 2007. View Article : Google Scholar : PubMed/NCBI
|
33
|
Mercer TR, Dinger ME and Mattick JS: Long
non-coding RNAs: Insights into functions. Nat Rev Genet.
10:155–159. 2009. View
Article : Google Scholar : PubMed/NCBI
|
34
|
Gupta RA, Shah N, Wang KC, Kim J, Horlings
HM, Wong DJ, Tsai MC, Hung T, Argani P, Rinn JL, et al: Long
noncoding RNA HOTAIR reprograms chromatin state to promote cancer
metastasis. Nature. 464:1071–1076. 2010. View Article : Google Scholar : PubMed/NCBI
|
35
|
Toonen EJ, Barrera P, Radstake TR, van
Riel PL, Scheffer H, Franke B and Coenen MJ: Gene expression
profiling in rheumatoid arthritis: Current concepts and future
directions. Ann Rheum Dis. 67:1663–1669. 2008. View Article : Google Scholar : PubMed/NCBI
|
36
|
Mattick JS and Gagen MJ: The evolution of
controlled multitasked gene networks: The role of introns and other
noncoding RNAs in the development of complex organisms. Mol Biol
Evol. 18:1611–1630. 2001. View Article : Google Scholar : PubMed/NCBI
|
37
|
Mattick JS: Linc-ing Long noncoding RNAs
and enhancer function. Dev Cell. 19:485–486. 2010. View Article : Google Scholar : PubMed/NCBI
|
38
|
Yi Z, Li J, Gao K and Fu Y: Identifcation
of differentially expressed long non-coding RNAs in CD4+ T cells
response to latent tuberculosis infection. J Infect. 69:558–568.
2014. View Article : Google Scholar : PubMed/NCBI
|