Association of xeroderma pigmentosum complementation group G Asp1104His polymorphism with breast cancer risk: A cumulative meta‑analysis

  • Authors:
    • Xiao‑Ming Xu
    • Long‑Chuan Xie
    • Ling‑Ling Yuan
    • Xiao‑Li Hu
    • Jian‑Qiang Jin
    • Yu‑Ming Niu
  • View Affiliations

  • Published online on: August 11, 2014     https://doi.org/10.3892/mco.2014.384
  • Pages: 1177-1181
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Abstract

The xeroderma pigmentosum complementation group G (XPG) gene plays an important role in the DNA nucleotide excision repair (NER) pathway. Several studies have investigated the association between the XPG Asp1104His polymorphism and breast cancer; however, the results have been inconsistent. therefore, we conducted a meta‑analysis of 8 published articles (10 case‑control studies) including a total of 5,235 patients with breast cancer and 5,685 healthy controls. The results demonstrated that the XPG Asp1104His polymorphism was not associated with breast cancer in the overall population [His vs. Asp, odds ratio (OR)=1.00, 95% confidence interval (CI): 0.91‑1.08; His/His vs. Asp/Asp, OR=0.96, 95% CI: 0.83‑1.11; Asp/His vs. Asp/Asp, OR=1.02, 95% CI: 0.94‑1.11; His/His+Asp/His vs. Asp/Asp, OR=1.03, 95% CI: 0.92‑1.15; and His/His vs. Asp/Asp+Asp/His, OR=0.93, 95% CI: 0.81‑1.06]. In the subgroup analysis by ethnicity, no significant association was observed in European subjects. In conclusion, this meta‑analysis suggested that the XPG Asp1104His polymorphism is not associated with breast cancer risk.

Introduction

Breast cancer is the most frequently diagnosed cancer and the leading cause of cancer-related mortality among women worldwide, accounting for 1.38 million new cancer cases and 458,400 deaths in 2008 (1). Over the last few years, the incidence rates of breast cancer have increased in most countries. Several studies have found that the development of breast cancer is possibly associated with tobacco, alcohol consumption and other environmental factors (2,3). Furthermore, interindividual differences, including single-nucleotide polymorphisms, may affect protein activity and alter the susceptibility to developing breast cancer. The nucleotide excision repair (NER) system plays an important role in DNA repair; this system recognizes the DNA damage and incises the DNA strand on both sides of the lesion, removes the oligonucleotide containing the damage and reconstructs the corrected fragment.

The xeroderma pigmentosum complementation group G (XPG) gene is an important component of the NER system and is also referred to as excision repair cross-complementation group 5 (ERCC5). The fundamental structure of the human ERCC5 protein contains N- and I-nuclease domains that are highly conserved and collectively form the nuclease core. The N- and I-nuclease domains are separated by 600 amino acids that constitute a critical region for protein-protein interactions, including with transcription factor IIH (TFIIH) and replication protein A (RPA) and combine ERCC5 with the sites of NER (4).

The mutation of nucleotides may alter gene function and affect protein construction, which in turn alters the mechanical interactions and the function of the NER system during cellular DNA repair. The Asp1104His (G>C) polymorphism (rs17655) results in an aspartic acid to histidine transition at position 1104 in exon 15, which may affect protein activity and interaction with TFIIH, affect the NER system and alter genetic susceptibility to cancer (5,6).

It was previously demonstrated that the variant genotype may affect susceptibility to different diseases, such as lung cancer (7) and bladder cancer (8), in different ethnicities and increase the risk of progression from HIV infection to AIDS (9). In 2003, Kumar et al (10) reported the first study on the association between the XPG Asp1104His polymorphism and breast cancer risk. To date, several studies on the XPG Asp1104His polymorphism and breast cancer have been conducted. However, the results of those studies have been inconsistent or even contradictory. Therefore, we performed the meta-analysis to assess the association between the XPG Asp1104His polymorphism and breast cancer risk based on the currently available published studies.

Materials and methods

Search strategy

The US National Library of Medicine’s PubMed database was searched using the terms ‘breast cancer’, ‘XPG’, ‘ERCC5’, ‘polymorphism’ and their combinations for all genetic studies on the association between Asp1104His polymorphism and breast cancer risk during the time period from 2003, when the first study was reported by Kumar et al (10), to May, 2014. The ‘Related Articles’ application was used to identify additional studies on the same subject. All the studies were selected using the following three criteria: i) case-control study of the XPG Asp1104His polymorphism and breast cancer; ii) sufficient published data for estimating odds ratios (ORs) with 95% confidence intervals (CIs); and iii) when multiple publications reported similar or overlapping data, we selected the largest or most recent publication, as recommended by Little et al (11) The characteristics of the studies are summarized in Table I.

Table I

Characteristics of case-control studies on XPG Asp1104His polymorphism and breast cancer risk included in the meta-analysis.

Table I

Characteristics of case-control studies on XPG Asp1104His polymorphism and breast cancer risk included in the meta-analysis.

Genotype distribution

CasesControls


First authorYearCountryRacial descentSource of controlsCasesControlsAsp/AspAsp/HisHis/HisAsp/AspAsp/HisHis/HisP for HWEa(Refs.)
Kumar2003FinlandCaucasianPB2203081089616182107190.54(10)
Mechanic2006AmericaCaucasianPB1,2491,13377140969661412600.69(16)
Mechanic2006AmericaAfricanPB7576742313871392313201230.51(16)
Shen2006AmericaCaucasianSisters15415183638826270.27(17)
Crew2007AmericaCaucasianPB9991,05156237166571409710.85(18)
Jorgensen2007AmericaCaucasianPB264275159931216595150.78(19)
Rajaraman2008AmericaMixedPB8191,07948228849674352530.42(20)
Smith2008AmericaCaucasianHB32040819511312256124280.02(21)
Smith2008AmericaAfricanHB5275133271837200.91(21)
Ming-Shiean2010ChinaAsianHB401531134191761592431290.06(22)

a Hardy-Weinberg equilibrium in controls.

{ label (or @symbol) needed for fn[@id='tfn2-mco-02-06-1177'] } XPG, xeroderma pigmentosum complementation group G; PB, population-based; HB, hospital-based.

Data extraction

Two investigators (Xu and Xie) independently extracted the following data from the 8 publications: first author’s name, publication year, country of origin, source of controls, racial descent of the study population (Asian, African, European and mixed), number of different genotypes and Hardy-Weinberg equilibrium (HWE) in controls.

Statistical analysis

Crude ORs with 95% CIs were computed to assess the strength of the association between the XPG Asp1104His polymorphism and breast cancer risk for the allele contrast (His vs. Asp), codominant model (His/His vs. Asp/Asp; Asp/His vs. Asp/Asp), dominant model (His/His+Asp/His vs. Asp/Asp) and recessive model (His/His vs. Asp/Asp+Asp/His). Subgroup statistical analysis was only conducted in Europeans, owing to the small sample of African and Asian subjects. Heterogeneity was assessed with the Chi-square-based Q test (12) and the pooled OR estimation of each study was calculated with the random-effects model (DerSimonian and Laird method) when P<0.10 (13); otherwise, the fixed-effects model (Mantel-Haenszel method) was used (14). Publication bias was evaluated with the funnel plot and the linear regression asymmetry test by Egger et al (15). P<0.05 was considered to reflect significant publication bias. Statistical analysis was performed with STATA software, version 11.0 (StataCorp, College Station, TX, USA), using two-sided P-values.

Results

Study characteristics

A total of 8 eligible articles (10 case-control studies) including 5,235 patients with breast cancer and 5,685 healthy control subjects, were included in this meta-analysis (10,1622). Of the 10 studies, 6 were conducted in European, 2 in African, 1 in Asian and 1 in mixed populations. The genotyping methods comprised polymerase chain reaction-restriction fragment length polymorphism, TaqMan and sequence detection system. The distribution of genotypes in the controls was in agreement with HWE, as in the study by Smith et al (21) in European subjects.

Meta-analysis

The results of this meta-analysis and heterogeneity assessment are presented in Table II. Overall, there were no significant associations between the XPG Asp1104His polymorphism and breast cancer risk (His vs. Asp, OR=1.00, 95% CI: 0.91–1.08, Ph=0.082; His/His vs. Asp/Asp, OR=0.96, 95% CI: 0.83–1.11, Ph=0.265; Asp/His vs. Asp/Asp, OR=1.02, 95% CI: 0.94–1.11, Ph=0.098; His/His+Asp/His vs. Asp/Asp, OR=1.03, 95% CI: 0.92–1.15, Ph=0.089, Fig. 1; and His/His vs. Asp/Asp+Asp/His, OR=0.93, 95% CI: 0.81–1.06, Ph=0.286). In the subgroup analysis by ethnicity, we also did not identify any significant associations between the XPG Asp1104His polymorphism and breast cancer risk in European subjects. Further analysis was performed only with studies that fulfilled HWE and no significant associations were observed.

Table II

Summary ORs and 95% CIs of XPG Asp1104His polymorphism and breast cancer risk.

Table II

Summary ORs and 95% CIs of XPG Asp1104His polymorphism and breast cancer risk.

His vs. AspHis/His vs. Asp/AspAsp/His vs. Asp/AspHis/His+Asp/His vs. Asp/AspHis/His vs. Asp/Asp+Asp/His





VariablesNo.aOR95% CIP PhbOR95% CIP PhbOR95% CIP PhbOR95% CIP PhbOR95% CIP Phb
Total101.000.91–1.080.920.0820.960.83–1.110.620.2651.020.94–1.110.570.0981.030.92–1.150.620.0890.930.81–1.060.290.286
HWE91.000.91–1.100.980.0540.990.85–1.150.880.3621.040.92–1.170.570.0881.020.91–1.16-0.0610.950.83–1.090.480.420
Ethnicity
 Caucasian71.000.94–1.080.900.1481.010.84–1.220.940.4911.010.92–1.100.900.0581.030.91–1.180.630.0721.010.84–1.210.950.556
 African21.050.91–1.210.500.1731.060.79–1.420.680.1521.210.96–1.520.100.9831.170.94–1.450.150.6030.740.33–1.660.470.088
Design
 Population-based61.040.94–1.150.490.0741.080.91–1.270.380.7561.020.93–1.110.680.0211.060.91–1.230.450.0211.040.89–1.220.620.928
 Hospital-based30.870.15–1.000.050.5730.65c0.48–0.89c0.006c0.748c1.060.86–1.300.610.5090.950.78–1.160.610.5260.66c0.50–0.87c0.003c0.456c

a Number of comparisons.

b Test for heterogeneity.

c Statistical significance.

{ label (or @symbol) needed for fn[@id='tfn6-mco-02-06-1177'] } Bold print denotes statistical significance. OR, odds ratio; CI, confidence interval; XPG, xeroderma pigmentosum complementation group G; HWE, Hardy-Weinberg equilibrium.

Publication bias

Funnel plots were drawn and Egger’s tests were performed to access publication bias. The shape of the funnel plots revealed symmetricity (Fig. 2, His/His+Asp/His vs. Asp/Asp model). These results were further supported by analysis via Egger’s tests, which suggested that all models without significant publication bias (P=0.986 for His vs. Asp; P=0.456 for His/His vs. Asp/Asp; P=0.217 for Asp/His vs. Asp/Asp; P=0.484 for His/His+Asp/His vs. Asp/Asp; and P=0.440 for His/His vs. Asp/Asp+Asp/His).

Cumulative and sensitivity analysis

Studies were sequentially deleted to determine the effect of the individual dataset on the pooled ORs (Fig. 3, His/His+Asp/His vs. Asp/Asp model). The results were consistent in all the genetic models, indicating that our results are statistically robust. In the cumulative meta-analysis, results that became negative from the second study were accumulated (Fig. 4, His/His+Asp/His vs. Asp/Asp model).

Discussion

The XPG gene is located on chromosome 13q33 and encodes a 1,186-amino acid structure-specific endonuclease, which is a member of the flap endonuclease family and plays an important role in the NER system (23). This enzyme may combine actions with XPB helicase and ERCC2/XPD helicase at the DNA damage site (7) and make 3′-incisions in human NER through incising DNA at a junction of single- to double-stranded DNA, such as bubbles and loop structures (24). A dual incision may be performed, with ERCC1-XPF making the 5′-incision. Additionally, XPG may involved in the stabilization of a pre-incision complex on the damaged DNA and stimulate the binding of human endonuclease III to thymine and glycol-containing DNA (25). A previous molecular study reported that the deficiency of XPG may result in certain epithelial diseases, such as XP (26). Furthermore, several studies also indicated that mutations in the XPG gene are associated with the development of diseases such as lung cancer and osteosarcoma (27,28).

Previous reports on the association between the XPG Asp1104His polymorphism and breast cancer were discrepant or even contradictory. Kumar et al (10) found that the genotype with the C allele (His) was associated with a ~1.5-fold increased risk for breast cancer in European subjects (OR=1.5, 95% CI: 1.04–2.16) in 2003. By contrast, Ming-Shiean et al (22) considered the G allele variant (Asp) to be significantly associated with breast cancer in Asian subjects (OR=1.42, 95% CI: 1.08–1.97). However, other studies reported no association between the XPG Asp1104His polymorphism and breast cancer risk.

This meta-analysis included 10 case-control studies, involving 5,235 patients with breast cancer and 5,685 healthy controls. No significant association was found between the XPG Asp1104His polymorphism and breast cancer risk, not even in the subgroup analysis of European subjects. According to the results, certain limitations of this meta-analysis need to be addressed. First, the sample of breast cancer patients and controls was inadequate to reach a definitive conclusion. Second, we were unable to obtain more original data and the results were based on unadjusted estimates, lacking the evaluation of the covariates of age, menopausal status, smoking and alcohol consumption and other environmental factors, which limited the evaluation of the interaction effect of genes and environmental or other factors. Third, there was some heterogeneity in different models, but it was successfully removed or alleviated in the subgroup analysis. Despite these limitations, the statistical assessment of publication bias, cumulative and sensitivity analyses all indicated that our results are credible.

In conclusion, our meta-analysis indicated that the XPG Asp1104His polymorphism is not associated with breast cancer risk. However, further, large-scale epidemiological studies are required to validate these conclusions.

Acknowledgements

We gratefully acknowledge the support of the subjects who participated in this study. This study was partly supported by grants from the Foundation of the Ministry of Education of Hubei Province (no. D20142102), the Foundation of Hubei University of Medicine (no. 2013GPY07) and the Taihe Hospital (nos. EBM2013006 and EBM2013031).

References

1 

Jemal A, Bray F, Center MM, Ferlay J, Ward E and Forman D: Global cancer statistics. CA Cancer J Clin. 61:69–90. 2011. View Article : Google Scholar

2 

Conlon MS, Johnson KC, Bewick MA, Lafrenie RM and Donner A: Smoking (active and passive), N-acetyltransferase 2, and risk of breast cancer. Cancer Epidemiol. 34:142–149. 2010. View Article : Google Scholar : PubMed/NCBI

3 

Beasley JM, Coronado GD, Livaudais J, et al: Alcohol and risk of breast cancer in Mexican women. Cancer Causes Control. 21:863–870. 2010. View Article : Google Scholar : PubMed/NCBI

4 

Thorel F, Constantinou A, Dunand-Sauthier I, et al: Definition of a short region of XPG necessary for TFIIH interaction and stable recruitment to sites of UV damage. Mol Cell Biol. 24:10670–10680. 2004. View Article : Google Scholar : PubMed/NCBI

5 

Collins A and Harrington V: Repair of oxidative DNA damage: assessing its contribution to cancer prevention. Mutagenesis. 17:489–493. 2002. View Article : Google Scholar : PubMed/NCBI

6 

Berwick M and Vineis P: Markers of DNA repair and susceptibility to cancer in humans: an epidemiologic review. J Natl Cancer Inst. 92:874–897. 2000. View Article : Google Scholar

7 

Kiyohara C and Yoshimasu K: Genetic polymorphisms in the nucleotide excision repair pathway and lung cancer risk: a meta-analysis. Int J Med Sci. 4:59–71. 2007. View Article : Google Scholar : PubMed/NCBI

8 

Sanyal S, Festa F, Sakano S, et al: Polymorphisms in DNA repair and metabolic genes in bladder cancer. Carcinogenesis. 25:729–734. 2004. View Article : Google Scholar : PubMed/NCBI

9 

Sobti RC, Berhane N, Mehedi SA, et al: Association and impact of XPG Asp 1104 His gene polymorphism in HIV 1 disease progression to AIDS among north Indian HIV seropositive individuals. Mol Biol Rep. 37:317–324. 2010. View Article : Google Scholar : PubMed/NCBI

10 

Kumar R, Hoglund L, Zhao C, Forsti A, Snellman E and Hemminki K: Single nucleotide polymorphisms in the XPG gene: determination of role in DNA repair and breast cancer risk. Int J Cancer. 103:671–675. 2003. View Article : Google Scholar : PubMed/NCBI

11 

Little J, Bradley L, Bray MS, et al: Reporting, appraising, and integrating data on genotype prevalence and gene-disease associations. Am J Epidemiol. 156:300–310. 2002. View Article : Google Scholar : PubMed/NCBI

12 

Lau J, Ioannidis JP and Schmid CH: Quantitative synthesis in systematic reviews. Ann Intern Med. 127:820–826. 1997. View Article : Google Scholar : PubMed/NCBI

13 

DerSimonian R and Laird N: Meta-analysis in clinical trials. Control Clin Trials. 7:177–188. 1986. View Article : Google Scholar : PubMed/NCBI

14 

Mantel N and Haenszel W: Statistical aspects of the analysis of data from retrospective studies of disease. J Natl Cancer Inst. 22:719–748. 1959.PubMed/NCBI

15 

Egger M, Davey Smith G, Schneider M and Minder C: Bias in meta-analysis detected by a simple, graphical test. BMJ. 315:629–634. 1997. View Article : Google Scholar : PubMed/NCBI

16 

Mechanic LE, Millikan RC, Player J, et al: Polymorphisms in nucleotide excision repair genes, smoking and breast cancer in African Americans and whites: a population-based case-control study. Carcinogenesis. 27:1377–1385. 2006. View Article : Google Scholar : PubMed/NCBI

17 

Shen J, Desai M, Agrawal M, et al: Polymorphisms in nucleotide excision repair genes and DNA repair capacity phenotype in sisters discordant for breast cancer. Cancer Epidemiol Biomarkers Prev. 15:1614–1619. 2006. View Article : Google Scholar : PubMed/NCBI

18 

Crew KD, Gammon MD, Terry MB, et al: Polymorphisms in nucleotide excision repair genes, polycyclic aromatic hydrocarbon-DNA adducts, and breast cancer risk. Cancer Epidemiol Biomarkers Prev. 16:2033–2041. 2007. View Article : Google Scholar : PubMed/NCBI

19 

Jorgensen TJ, Visvanathan K, Ruczinski I, Thuita L, Hoffman S and Helzlsouer KJ: Breast cancer risk is not associated with polymorphic forms of xeroderma pigmentosum genes in a cohort of women from Washington County, Maryland. Breast Cancer Res Treat. 101:65–71. 2007. View Article : Google Scholar : PubMed/NCBI

20 

Rajaraman P, Bhatti P, Doody MM, et al: Nucleotide excision repair polymorphisms may modify ionizing radiation-related breast cancer risk in US radiologic technologists. Int J Cancer. 123:2713–2716. 2008. View Article : Google Scholar : PubMed/NCBI

21 

Smith TR, Levine EA, Freimanis RI, et al: Polygenic model of DNA repair genetic polymorphisms in human breast cancer risk. Carcinogenesis. 29:2132–2138. 2008. View Article : Google Scholar : PubMed/NCBI

22 

Ming-Shiean H, Yu JC, Wang HW, et al: Synergistic effects of polymorphisms in DNA repair genes and endogenous estrogen exposure on female breast cancer risk. Ann Surg Oncol. 17:760–771. 2010. View Article : Google Scholar : PubMed/NCBI

23 

Harrington JJ and Lieber MR: Functional domains within FEN-1 and RAD2 define a family of structure-specific endonucleases: implications for nucleotide excision repair. Genes Dev. 8:1344–1355. 1994. View Article : Google Scholar

24 

Matsunaga T, Park CH, Bessho T, Mu D and Sancar A: Replication protein A confers structure-specific endonuclease activities to the XPF-ERCC1 and XPG subunits of human DNA repair excision nuclease. J Biol Chem. 271:11047–11050. 1996. View Article : Google Scholar

25 

Bessho T: Nucleotide excision repair 3′ endonuclease XPG stimulates the activity of base excision repair enzyme thymine glycol DNA glycosylase. Nucleic Acids Res. 27:979–983. 1999.

26 

Fagbemi AF, Orelli B and Scharer OD: Regulation of endonuclease activity in human nucleotide excision repair. DNA Repair (Amst). 10:722–729. 2011. View Article : Google Scholar : PubMed/NCBI

27 

Chang JS, Wrensch MR, Hansen HM, et al: Nucleotide excision repair genes and risk of lung cancer among San Francisco Bay Area Latinos and African Americans. Int J Cancer. 123:2095–2104. 2008. View Article : Google Scholar

28 

Biason P, Hattinger CM, Innocenti F, et al: Nucleotide excision repair gene variants and association with survival in osteosarcoma patients treated with neoadjuvant chemotherapy. Pharmacogenomics J. 12:476–483. 2012. View Article : Google Scholar : PubMed/NCBI

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Spandidos Publications style
Xu XM, Xie LC, Yuan LL, Hu XL, Jin JQ and Niu YM: Association of xeroderma pigmentosum complementation group G Asp1104His polymorphism with breast cancer risk: A cumulative meta‑analysis. Mol Clin Oncol 2: 1177-1181, 2014.
APA
Xu, X., Xie, L., Yuan, L., Hu, X., Jin, J., & Niu, Y. (2014). Association of xeroderma pigmentosum complementation group G Asp1104His polymorphism with breast cancer risk: A cumulative meta‑analysis. Molecular and Clinical Oncology, 2, 1177-1181. https://doi.org/10.3892/mco.2014.384
MLA
Xu, X., Xie, L., Yuan, L., Hu, X., Jin, J., Niu, Y."Association of xeroderma pigmentosum complementation group G Asp1104His polymorphism with breast cancer risk: A cumulative meta‑analysis". Molecular and Clinical Oncology 2.6 (2014): 1177-1181.
Chicago
Xu, X., Xie, L., Yuan, L., Hu, X., Jin, J., Niu, Y."Association of xeroderma pigmentosum complementation group G Asp1104His polymorphism with breast cancer risk: A cumulative meta‑analysis". Molecular and Clinical Oncology 2, no. 6 (2014): 1177-1181. https://doi.org/10.3892/mco.2014.384