microRNA‑574 inhibits cell proliferation and invasion in glioblastoma multiforme by directly targeting zinc finger E‑box‑binding homeobox 1
Retraction in: /10.3892/mmr.2022.12884
- Authors:
- Published online on: May 31, 2018 https://doi.org/10.3892/mmr.2018.9106
- Pages: 1826-1834
Abstract
Introduction
As the most commonly occurring and malignant type of brain tumour affecting humans, glioma is derived from neural stromal cells and is responsible for 81% of all malignant brain tumours in adults (1,2). Based on the degree of malignancy, gliomas are classified into four histopathologic grades (3). Glioblastoma multiforme (GBM), the most aggressive type of malignant glioma, is characterised by extensive invasion, rapid growth, apoptosis resistance and abundant angiogenesis (4). Several risk factors for GBM have been validated, including genetic factors, biochemical environment, ionising radiation, nitroso compounds, air contamination and unhealthy lifestyles (3,4). Despite recent improvements in multimodal treatment methods, including surgery, postoperative radiotherapy and chemotherapy, the therapeutic outcome of these patients remains poor, with a 5-year overall survival rate of <10% (5). The median survival time of patients with GBM is reported to be <15 months following diagnosis (6). Therefore, an improved understanding of the mechanisms responsible for the occurrence and development of GBM is necessary to develop novel strategies in diagnosis, prognostic evaluation and clinical treatment for patients with this disease.
microRNAs (miRNAs) are endogenous, noncoding and small, 18–23 nucleotide-long RNAs (7). miRNAs are known to negatively modulate gene expression through base pairing with the 3′ untranslated regions (3′-UTRs) of their target genes and subsequently inhibiting the translation and/or promoting the degradation of the mRNA (8). To date, >1,000 miRNAs have been identified in the human genome; combined, these miRNAs are predicted to regulate >5,300 human genes that represent 30% of the human genome (9). Increasing evidence has demonstrated that aberrantly expressed miRNAs may be associated with numerous disorders, particularly cancers (10). Dysregulation of miRNAs has been reported in almost all types of malignancy, including glioma (11), gastric cancer (12), lung cancer (13), ovarian cancer (14) and bladder cancer (15). miRNAs are involved in tumourigenesis and tumour development through participation in the regulation of diverse biological processes, including cell proliferation, cycle, apoptosis, angiogenesis, migration, invasion, metastasis and epithelial-mesenchymal transition (16–18). Therefore, further investigation into the biological role of GBM-associated miRNAs may aid the identification of novel therapeutic approaches for patients with this disease.
Numerous studies have reported that miRNA-574 (miR-574) is expressed aberrantly in multiple types of human cancer, including gastric cancer (19), breast cancer (20) and bladder cancer (21). However, the expression pattern, biological functions and molecular mechanism of miR-574 in GBM remain unclear. Therefore, the present study aimed to measure the expression level and biological functions of miR-574 in GBM and identify the underlying molecular mechanisms.
Materials and methods
Tissue specimens and cell lines
The present study was approved by the Ethics Committee of Weifang People's Hospital (Weifang, China). All patients who participated in this research signed the informed consent form prior to enrollment. GBM tissues and corresponding adjacent normal brain tissues were obtained from 28 patients with GBM (17 males, 11 females; age range, 45–72 years-old) that were treated with surgical resection at Weifang People's Hospital between July 2014 and September 2016. None of these patients with GBM had undergone radiotherapy or chemotherapy prior to tissue collection. All tissues were immediately frozen and stored in liquid nitrogen until RNA isolation.
Normal human astrocytes (NHA) were acquired from ScienCell Research Laboratories, Inc. (San Diego, CA, USA) and maintained in astrocyte medium (ScienCell Research Laboratories, Inc.), according to the manufacturer's protocol. A total of four human GBM cell lines, including T98G, LN229, U138 (also termed U138 MG) and U251 (also termed U251 MG), were purchased from the Shanghai Cell Bank of the Chinese Academy of Sciences (Shanghai, China). All GBM cell lines were maintained in Dulbecco's modified Eagle's medium (DMEM) with 10% fetal bovine serum (FBS), 100 U/ml penicillin and 100 ng/ml streptomycin, all of which were obtained from Invitrogen (Thermo Fisher Scientific, Inc., Waltham, MA, USA), and were cultured at 37°C in a humidified incubator containing 5% CO2.
Oligonucleotides, plasmids and cell transfection
miR-574 mimics and negative control miRNA (miR-NC) were obtained from Guangzhou RiboBio Co., Ltd. (Guangzhou, China). The miR sequences were as follows: miR-574 mimics, 5′-CACGCUCAUGCACACCCCACA-3′ and miR-NC, 5′-UUCUCCGAACGUGUCACGUTT-3′. Zinc finger E-box-binding homeobox 1 (ZEB1) overexpression vector pcDNA3.1-ZEB1 and empty vector pcDNA3.1 were chemically produced by Shanghai GenePharma Co., Ltd. (Shanghai, China). Cells were plated into 6-well plates with a density of 6×105 cells/well one night prior to transfection. Oligonucleotides (100 pmol) and plasmids (4 µg) were transfected into cells using Lipofectamine® 2000 (Invitrogen; Thermo Fisher Scientific, Inc.), according to the manufacturer's protocol. The culture medium was subsequently replaced with fresh DMEM containing 10% FBS at 8 h post-transfection.
Reverse transcription-quantitative polymerase chain reaction (RT-qPCR) of miRNAs and mRNAs
TRIzol reagent (Invitrogen; Thermo Fisher Scientific, Inc.) was used to isolate total RNA from tissue samples or cultured cells. For the analysis of miR-574 expression, total RNA was reverse transcribed into cDNA using a TaqMan MicroRNA Reverse Transcription kit (Applied Biosystems; Thermo Fisher Scientific, Inc.), according to the manufacturer's protocols. Subsequent qPCR was performed with a TaqMan MicroRNA qPCR assay kit (Applied Biosystems; Thermo Fisher Scientific, Inc.), according to the manufacturer's protocol. The thermocycling conditions for qPCR were as follows: 50°C for 2 min, 95°C for 10 min; 40 cycles of denaturation at 95°C for 15 sec and annealing/extension at 60°C for 60 sec. To quantify ZEB1 mRNA expression, cDNA was synthesised from total RNA with a PrimeScript RT Reagent kit (Takara Biotechnology Co., Ltd., Dalian, China), followed by qPCR with a SYBR Premix Ex Taq kit (Takara Biotechnology Co., Ltd.) using an ABI Prism 7300 System (Applied Biosystems; Thermo Fisher Scientific, Inc.). The thermocycling conditions for qPCR were as follows: 5 min at 95°C, followed by 40 cycles of 95°C for 30 sec and 65°C for 45 sec. U6 small nuclear RNA and GAPDH were used as internal controls for miR-574 and ZEB1 mRNA, respectively. The primers used were as follows: miR-574 forward, 5′-TACGATGAGTGTGTGTGTGTGAGTGT-3′ and reverse, 5′-GTCCTTGGTGCCCGAGTG-3′; U6 forward, 5′-GCTTCGGCAGCACATATACTAAAAT-3′ and reverse, 5′-CGCTTCACGAATTTGCGTGTCAT-3′; ZEB1 forward, 5′-TTCAAACCCATAGTGGTTGCT-3′ and reverse, 5′-TGGGAGATACCAAACCAACTG-3′ and GAPDH forward, 5′-ACCCAGAAGACTGTGGATGG-3′ and reverse, 5′-CAGTGAGCTTCCCGTTCAG-3′. Each sample was analysed in triplicate and data were analysed using the 2−ΔΔCq method (22).
Cell Counting kit-8 (CCK-8) assay
A CCK-8 assay was used to detect cell proliferative ability in vitro. Briefly, transfected cells were collected at 24 h post-transfection and were plated into 96-well plates at a density of 3×103 cells/well and incubated at 37°C with 5% CO2 for 0, 24, 48 and 72 h. At each time-point, 10 µl CCK-8 reagent (Beyotime Institute of Biotechnology, Haimen, China) was added into each well. Subsequently, the plates were incubated at 37°C with 5% CO2 for an additional 2 h. Finally, the absorbance at a wavelength of 450 nm was determined using a SpectraMax M3 microplate reader (Molecular Devices, LLC, Sunnyvale, CA, USA). Each assay was performed in triplicate and repeated three times.
Transwell matrigel invasion assay
Transwell chambers (8 µM pore size; Corning Incorporated, Corning, NY, USA) coated with Matrigel (100 µg/well; BD Biosciences, San Jose, CA, USA) were used to evaluate cell invasion capacity in vitro. After 24 h post-transfection, 5×104 transfected cells were suspended in 250 µl FBS-free DMEM and seeded in the upper chambers. A total of 600 µl DMEM containing 20% FBS was placed into the lower chambers as the chemoattractant. The chambers were incubated at 37°C in 5% CO2 for 24 h. Cells remaining in the upper chambers were gently removed using a cotton swab. The invasive cells attached to the lower surface of the chambers were fixed with 95% ethanol at room temperature for 15 min and stained with 0.1% crystal violet (Beyotime Institute of Biotechnology) at room temperature for 15 min. The number of invasive cells was manually counted in five randomly selected fields of view under an inverted light microscope (Olympus IX53; magnification, ×200; Olympus Corporation, Tokyo, Japan). Each assay was independently repeated three times.
Bioinformatics prediction and luciferase reporter assay
TargetScan (www.targetscan.org) and miRanda (www.microrna.org) were used to predict the potential targets of miR-574. Luciferase plasmids containing the wild-type or mutated putative miR-574 seed-matching sites in the 3′-UTR of ZEB1 were chemically synthesised by Shanghai GenePharma Co., Ltd. and termed pmirGLO-ZEB1-3′-UTR Wt and pmirGLO-ZEB1-3′-UTR Mut, respectively. For reporter assays, cells were seeded into 24-well plates at a density of 1.0×105 one day prior to transfection. Cells were transfected with miR-574 mimics (50 pmol) or miR-NC (50 pmol) along with pmirGLO-ZEB1-3′-UTR Wt (0.2 µg) or pmirGLO-ZEB1-3′-UTR Mut (0.2 µg) using Lipofectamine 2000, according to the manufacturer's protocol. The luciferase activity was assayed at 48 h after transfection using a Dual-Luciferase Reporter Assay system (Promega Corporation, Madison, WI, USA). Firefly luciferase activity was normalised to Renilla luciferase activity.
Western blot analysis
Tissues and cultured cells were lysed with radioimmunoprecipitation assay lysis buffer (Beyotime Institute of Biotechnology) containing protease inhibitors (EMD Millipore, Billerica, MA, USA). The total protein concentration was quantified with a bicinchoninic acid protein assay kit (Beyotime Institute of Biotechnology). Equal amounts of total protein (30 µg) were separated by 10% SDS-PAGE and were subsequently transferred onto polyvinylidene difluoride membranes (EMD Millipore) using an electroblotting method. After 2 h of blocking at room temperature in 5% non-fat milk in TBS containing 0.1% Tween-20 (TBST), the membranes were incubated at 4°C overnight with primary antibodies against ZEB1 (cat. no. sc-81428; 1:1,000 dilution; Santa Cruz Biotechnology, Inc., Dallas, TX, USA) or GAPDH (cat. no. sc-32233; 1:1,000 dilution; Santa Cruz Biotechnology, Inc.). Following washing three times with TBST, the membranes were probed with goat anti-mouse horseradish peroxidase-conjugated secondary antibodies (cat. no. sc-2005; 1:5,000 dilution; Santa Cruz Biotechnology, Inc.) at room temperature for 2 h. Finally, the protein bands were visualised using BeyoECL Plus kit (Beyotime Institute of Biotechnology) and analysed with ImageJ software (version 1.49; National Institutes of Health, Bethesda, MD, USA).
Statistical analysis
All data are presented as the mean ± standard deviation of ≥3 independent experiments and were analysed with Student's t-tests or one-way analysis of variance followed by Student-Newman-Keuls analysis. Spearman's correlation analysis was performed to determine the correlation between miR-574 and ZEB1 mRNA expression in GBM tissues. SPSS software (version 19.0; IBM Corp., Armonk, NY, USA) was used to perform statistical analysis. P<0.05 was considered to indicate a statistically significant difference.
Results
miR-574 expression is downregulated both in GBM tissues and cell lines
To determine the expression pattern of miR-57 in GBM, miR-574 expression was initially detected in 28 paired GBM tissues and corresponding adjacent normal brain tissues. RT-qPCR results demonstrated that miR-574 was significantly downregulated in GBM tissue samples compared with adjacent normal brain tissues (P<0.05; Fig. 1A). Subsequently, the expression levels of miR-574 in GBM cell lines was determined using RT-qPCR and NHA were used as controls. Consistent with the results from GBM tissues, miR-574 expression was downregulated in all examined GBM cell lines compared with NHA (P<0.05; Fig. 1B). The above results indicate that miR-574 may be involved in the regulation of GBM formation and progression.
miR-574 overexpression suppresses cell proliferation and invasion in GBM
The dysregulation of miR-574 in GBM tissues and cell lines was further investigated. T98G and U251 cells, which exhibited relatively low miR-574 expression compared with other cell lines included in the present study (Fig. 1B), were transfected with miR-574 mimics to increase the endogenous miR-574 levels. Successful upregulation of miR-574 expression was observed in miR-574 mimic-transfected T98G and U251 cells compared with cells transfected with miR-NC (P<0.05; Fig. 2A). A CCK-8 assay was subsequently conducted at different time-points following transfection to evaluate the effect of miR-574 overexpression on GBM cell proliferation. The results demonstrated that miR-574 upregulation resulted in a significant decrease in proliferation compared with miR-NC-transfected T98G and U251 cells at 48 and 72 h (P<0.05; Fig. 2B). Furthermore, a Transwell Matrigel invasion assay was used to determine cell invasion capacity following transfection with miR-574 mimics or miR-NC; overexpression of miR-574 in T98G and U251 cells significantly reduced their invasion abilities compared with the miR-NC group (P<0.05; Fig. 2C). These results indicate that miR-574 may serve tumour-suppressive roles in GBM.
ZEB1 is a direct target of miR-574 in GBM
To elucidate the mechanism by which miR-574 inhibited GBM cell proliferation and invasion, bioinformatics analysis was performed to identify the potential target genes of miR-574. ZEB1, which has been reported to participate in the regulation of the initiation and progression of GBM (23–26), was predicted as a candidate target of miR-574 and was further investigated in the present study for confirmation. The 3′-UTR of ZEB1 contains a conserved binding site for miR-574 (Fig. 3A). RT-qPCR and western blot analysis were performed to investigate whether miR-574 affects ZEB1 expression in GBM. These analyses revealed that ZEB1 expression was downregulated at both the mRNA (P<0.05; Fig. 3B) and protein (P<0.05; Fig. 3C) level in T98G and U251 cells following transfection with miR-574 mimics, compared with the miR-NC group. To further confirm that ZEB1 is a direct target of miR-574, a luciferase reporter assay was used to determine whether the 3′-UTR of ZEB1 may be directly targeted by miR-574. Introduction of miR-574 mimics in T98G and U251 cells transfected with the pmirGLO-ZEB1-3′-UTR Wt plasmid significantly inhibited the luciferase activity compared with the miR-NC group (P<0.05; Fig. 3D). However, mutation of the binding site completely eliminated the negative regulation of miR-574 overexpression on luciferase activity. Overall, these results indicate that ZEB1 is a direct target of miR-574 in GBM.
ZEB1 is upregulated and inversely correlated with miR-574 expression in GBM tissues
To further evaluate the association between miR-574 and ZEB1 in GBM, ZEB1 expression was determined in GBM tissues and corresponding adjacent normal brain tissues. RT-qPCR and western blot analysis indicated that the expression levels of ZEB1 mRNA (P<0.05; Fig. 4A) and protein (P<0.05; Fig. 4B) were significantly increased in GBM tissues compared with adjacent normal brain tissues. Additionally, Spearman's correlation analysis revealed an inverse association between miR-574 and ZEB1 mRNA expression in GBM tissues (r=−0.6485; P<0.001; Fig. 4C). These results further indicated that ZEB1 may be a target gene of miR-574 in GBM.
Reintroduction of ZEB1 attenuates the inhibitory effects of miR-574 on the proliferation and invasion of GBM cells
To further confirm that miR-574 mediates its tumour-suppressing effects in GBM via regulation of ZEB1, rescue experiments were performed in T98G and U251 cells co-transfected with miR-574 mimics and the ZEB1 overexpression vector, pcDNA3.1-ZEB1, or empty pcDNA3.1 vector. Following transfection, western blot analysis demonstrated that the decreased levels of ZEB1 as a result of miR-574 overexpression were rescued by co-transfection with pcDNA3.1-ZEB1 (P<0.05; Fig. 5A). Subsequently, CCK-8 and Transwell Matrigel invasion assays revealed that restored ZEB1 expression effectively prevented the inhibitory effects of miR-574 mimics on T98G and U251 cell proliferation (P<0.05 at 48 and 72 h; Fig. 5B) and invasion (P<0.05; Fig. 5C). Overall, these results illustrated that the tumour-suppressive roles of miR-574 in GBM were at least partially mediated by ZEB1.
Discussion
Previous studies have demonstrated that dysregulation of miRNAs contributes to the tumourigenesis and tumour development of GBM (27–29). Therefore, miRNAs may be developed as promising prognosis biomarkers and effective therapeutic targets for patients with GBM (30). In the present study, miR-574 was markedly downregulated in GBM tissues and cell lines. Furthermore, ectopic expression of miR-574 decreased cell proliferation and invasion in GBM. ZEB1 was demonstrated to be a direct target of miR-574 in GBM and upregulation of ZEB1 in GBM tissues was negatively correlated with miR-574 expression, indicating that downregulation of miR-574 in GBM may, at least partially, contribute to ZEB1 upregulation. Finally, the results of the rescue experiments demonstrated that miR-574 may inhibit GBM cell proliferation and invasion partially through the negative regulation of ZEB1. These results indicate that the miR-574/ZEB1 pathway may by a therapeutic target for patients with GBM.
Several studies have demonstrated that miR-574 is aberrantly expressed in multiple types of human cancer. For instance, miR-574 levels were demonstrated to be downregulated in gastric cancer tissues and cell lines, with low miR-574 expression being associated with tumour stage and differentiation (19). In breast cancer, the expression level of miR-574 was lower in tumour tissues compared with paired adjacent tissues (20). Decreased miR-574 expression was also reported in bladder cancer (21) and osteosarcoma (31). However, miR-574 expression was reported to be elevated in lung cancer; miR-574 expression levels in non-small cell lung cancer was associated with tumour stage and metastasis (32,33). In addition, miR-574 expression was validated as an independent prognostic risk factor for patients with small cell lung cancer (34). Furthermore, miR-574 upregulation was observed in papillary thyroid carcinoma (35) and colorectal cancer (36). These contrasting results indicate that the expression pattern of miR-574 in human malignancies is tissue specific.
miR-574 has been demonstrated to serve tumour-suppressing roles in various types of cancer. For example, enforced expression of miR-574 attenuated cell growth and metastasis in gastric cancer (19). Furthermore, Ujihira et al (20) reported that miR-574 inhibition reversed the suppression of breast cancer cell proliferation induced by tamoxifen. Tatarano et al (21) demonstrated that miR-574 upregulation inhibited cell proliferation, migration and invasion in bladder cancer. Recently, Xu et al (31) revealed that ectopic expression of miR-574 reduced cell proliferation and promoted apoptosis of osteosarcoma. By contrast, miR-574 served as an oncogene in lung cancer through regulation of cell proliferation, migration, invasion and metastasis (33,34,37). A study by Wang et al (35) indicated that miR-574 overexpression increased the cell proliferation and migration of papillary thyroid carcinoma. Ji et al (36) verified that restored expression of miR-574 promoted cell growth, motility and attenuated cell differentiation and cell cycle progression in colorectal cancer. The above results demonstrated that the biological functions of miR-574 in carcinogenesis and cancer progression are tissue specific and may serve as novel therapeutic candidates for the treatment of certain tumours.
To date, only a few miR-574 targets have been experimentally identified, which include cullin 2 in gastric cancer, clathrin heavy chain in breast cancer, talin rod domain-containing 1 in bladder cancer, protein tyrosine phosphatase receptor type U and forkhead box N3 in lung cancer, and suppressor of cancer cell invasion in papillary thyroid carcinoma (20,21,31,20). In the present study, ZEB1 was verified as a direct target of miR-574 in GBM. ZEB1, located at the short arm of human chromosome 10, is a member of the zinc finger family (38). ZEB1 was previously reported to be abundantly expressed in a number of human cancers, including cervical cancer (39), lung cancer (40), gastric cancer (41), endometrial cancer (42) and bladder cancer (43). ZEB1 dysregulation serves roles in numerous biological processes in tumourigenesis and tumour development, including cell growth, cell cycle, apoptosis, metastasis, epithelial-mesenchymal transition and angiogenesis (44–47). The expression levels of ZEB1 were previously reported to be increased in GBM tumour tissues and cell lines (23), and ZEB1 knockdown inhibited GBM cell proliferation, migration, invasion, epithelial-mesenchymal transition and chemoresistance (23–26). Considering the effect of ZEB1 on GBM, regulation of the miR-574/ZEB1 pathway may offer novel and efficient therapeutic opportunities for the treatment of GBM.
In conclusion, miR-574 is downregulated in GBM tissues and cell lines. Restoration of the expression of miR-574 inhibits GBM cell proliferation and invasion in vitro. Furthermore, ZEB1 is a direct and functional target of miR-574 in GBM. Further research investigating the tumour-suppressive roles of miR-574 in GBM may be beneficial in the development of novel therapeutic methods for patients with GBM.
Acknowledgements
Not applicable.
Funding
No funding was received.
Availability of data and materials
The datasets used and/or analyzed during the present study are available from the corresponding author on reasonable request.
Authors' contributions
CJW made substantial contributions to the design of the present study. YM detected miR-574 and ZEB1 expression in GBM tissues and cell lines. FW performed CCK-8 and Transwell Matrigel invasion assays in T98G and U251 cells. CHW conducted luciferase reporter assays and statistical analysis. All authors read and approved the final manuscript.
Ethics approval and consent to participate
The present study was approved by the Ethics Committee of Weifang People's Hospital (Weifang, China). All patients who participated in this research provided informed consent prior to enrollment.
Consent for publication
Not applicable.
Competing interests
The authors declare that they have no competing interests.
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