Prognostic potential of lncRNA RHPN1-AS1 in glioma
- Authors:
- Published online on: June 25, 2020 https://doi.org/10.3892/ol.2020.11773
- Pages: 2442-2446
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Copyright: © Wu et al. This is an open access article distributed under the terms of Creative Commons Attribution License.
Abstract
Introduction
Glioma covers about 40–50% of primary brain tumors and it is the most common type of malignant tumor in the central nervous system (1). Glioma is fatal because of its diversity, strong invasiveness and heterogeneity (2). Despite the rapid development of medical instruments and surgical techniques in the past decades, the mortality and disability of glioma are still ranked high. Most of glioma patients can only survive 1–2 years after diagnosis. It is estimated that the progression-free survival of glioma is 6.2–7.5 months, and the median survival is 14.6–16.7 months. The 2-year and 5-year survival of glioma is 27 and 9.8%, respectively (3). To prolong the survival of glioma patients, therapeutic strategies have been largely improved and their efficacies are still far from satisfactory. Developing novel and effective treatments for glioma has received considerable effort and support.
Long non-coding RNAs (LncRNAs) are long-chain, non-coding RNAs that barely encode proteins. They recognize specific DNAs or RNAs to further affect their translation or transcription. Moreover, lncRNAs fold into secondary or higher structures and bind to proteins, thereafter exerting a regulatory role by altering the activities or intracellular localization of corresponding proteins (4,5). It is reported that lncRNA level is closely linked to tumor phenotypes (5). LncRNA has shown potential to be a tumor hallmark. Differentially expressed lncRNAs have been identified in glioma tissues (6). In addition, some lncRNAs are responsible for tumor cell growth and metastasis of glioma (7).
LncRNA RHPN1-AS1 is a transcription product with 2,030 nucleotides (8). It is highly expressed in invasive tumors, including non-small cell lung cancer (NSCLC) and uveal melanoma (9,10). Overexpression of RHPN1-AS1 predicts a poor prognosis of tumor diseases. On the contrary, silence of RHPN1-AS1 suppresses proliferative and metastatic abilities of tumor cells (11). It is reported that lncRNA RHPN1-AS1 drives proliferation, migration and invasion in cervical cancer cells through activating the miR-299-3p/FGF2 axis (12). LncRNA RHPN1-AS1 also triggers the malignant progression of liver cancer (13). In glioma specimens and cell lines, RHPN1-AS1 is highly expressed. Knockdown of RHPN1-AS1 in glioma cells attenuates proliferative, migratory and invasive potentials (14). So far, the potential influence of RHPN1-AS1 on clinical features and prognosis of glioma is rarely reported. In this study, we assessed the prognostic potential of RHPN1-AS1 in glioma patients. Our findings not only provided new directions for clinical diagnosis and monitoring of glioma, but also opened a new field of gene therapy.
Patients and methods
Patients
A total of 105 cases of glioma tissues were surgically resected from glioma patients undergoing surgery in The Second People's Hospital of Wuhu (Wuhu, China) from June 2017 to December 2019. Among the 105 glioma patients, 59 were males and 46 were females, with a median age of 49.7 years and none of the patients included in the study were epileptic. According to the histological grade classification defined by the criteria of the 10th edition of International Classification of Diseases (ICD-10) (15), 54 cases were grade I–II and 51 were grade III–IV. Furthermore, 105 cases of normal brain tissues were collected from patients undergoing intracranial decompression for trauma in the same period. Subjects with medical history of anti-tumor therapy were excluded. Tissue samples were immediately frozen in liquid nitrogen and preserved at −80°C. Patients and their families in this study were fully informed.
The study was approved by the Ethics Committee of The Second People's Hospital of Wuhu. Signed informed consent was obtained from the patients and/or guardians.
RNA preparation and reverse-transcriptase polymerase chain reaction (RT-PCR)
Total RNA was extracted using TRIzol and then treated with RNase R (Epicentre Technologies Corp.). The mixture was incubated at 37°C for 1 h. Total RNA (1 μg) was transcribed into cDNA by Primescript RT Reagent (Takara Bio, Inc.). The PCR reactions were evaluated with 2% w/v agarose gels.
Quantitative real-time polymerase chain reaction (qRT-PCR)
Tissues were lysed for isolating total RNA using TRIzol method (Invitrogen; Thermo Fisher Scientific, Inc.). RNA was reversely transcribed into complementary deoxyribose nucleic acid (cDNA) using Primescript RT Reagent (Takara Bio, Inc.) and applied for qRT-PCR. Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) was used as the internal reference. RHPN1-AS1, forward: 5′-GCTCCTGGTCATCAAGTTCCTCT-3′, reverse: 5′-GCACAGGCACCAGAATGATCC-3′; GAPDH, forward: 5′-TGTTGCCATCAATGACCCCTT-3′, reverse: 5′-CTCCACGACGTACTCAGCG-3′.
Follow up
All subjects were followed up for 5 years through outpatient visit or by telephone. The duration from the date of initial surgery to the death was recorded. OS and RFS were finally calculated. Subjects who died of accidents or causes unrelated to glioma were excluded.
Statistical analysis
Statistical Product and Service Solutions (SPSS) 20.0 (IBM Corp.) was used for data analyses. Data were expressed as mean ± standard deviation. Differences between two groups were analyzed by the unpaired t-test. Kaplan-Meier method was introduced for survival analysis, followed by log-rank test for comparison. The correlation between RHPN1-AS1 level and pathological indicators of glioma patients was analyzed by Chi-square test. Potential factors influencing prognosis of glioma were analyzed by Cox regression model. P<0.05 was considered as statistically significant.
Results
Upregulation of RHPN1-AS1 in glioma
RHPN1-AS1 levels in glioma tissues (n=105) and normal brain tissues (n=105) were detected by qRT-PCR. The data showed higher abundance of RHPN1-AS1 in glioma tissues compared with those of normal brain tissues (Fig. 1A and B). It is indicated that RHPN1-AS1 may be involved in the progression of glioma.
Correlation between RHPN1-AS1 level and pathological indicators of glioma patients
According to the cut-off value of RHPN1-AS1 in the collected glioma tissues, the enrolled glioma patients were divided into high-level (n=49) and low-level (n=56) group. By analyzing their pathological data, it was demonstrated that RHPN1-AS1 level was correlated to histological grade (grade III–IV, P<0.001), KPS score (KPS <80, P=0.026) and postoperative recurrence (P=0.010) of glioma patients, rather than sex (P=0.563), age (P=0.328), pathological (P=0.537) or tumor size (P=0.052) (Table I).
Prognostic potential of RHPN1-AS1 in glioma
To further investigate the prognostic potential of RHPN1-AS1 in glioma, Kaplan-Meier method was introduced for assessing OS and RFS in enrolled glioma patients. OS was worse in glioma patients of high-level RHPN1-AS1 group than those in low-level group (HR=6.493, P=0.0108) (Fig. 2A). Similarly, worse RFS was observed in glioma patients of high-level RHPN1-AS1 group as well (HR=6.588, P=0.0103) (Fig. 2B). It is suggested that high level of RHPN1-AS1 is unfavorable for prognosis of glioma.
Risk factors of glioma prognosis
To determine the risk factors influencing the prognosis of glioma, univariate and multivariate COX regression analyses were conducted based on the pathological indicators of glioma patients and their 5-year survival. Advanced histological grade, KPS score <80 and high level of RHPN1-AS1 were considered to be risk factors influencing postoperative prognosis of glioma (Table II).
Discussion
Glioma is an intracranial neoplastic disease which is caused by the malignant proliferation of glial cells due to genetic and environmental changes. Clinical manifestations of glioma include headache, vomiting, epilepsy, lalopathy, hemiplegia and paresthesia (16). Severe glioma is fatal because of the occurrence of cerebral hernia. Therefore, it is necessary and urgent to develop effective treatment strategies for glioma (17).
LncRNAs have been verified to be functional mediators (18). Increasing evidence has shown the involvement of abnormally expressed lncRNAs in tumorigenesis and tumor progression (19–21). They extensively participate in the regulation of chromatin modification, transcription or post-transcription mediation (22,23). So far, lncRNAs are considered as a new type of promising hallmarks and therapeutic targets (24). Through microarray screening, lncRNA DANCR is verified to promote the malignant progression of glioma (25). LncRNA ZEB1-AS1 knockdown is able to block glioma cells to proliferate and metastasize (26).
LncRNA RHPN1-AS1 is a key regulatory in many types of tumors. Lu et al (10) reported that RHPN1-AS1 is upregulated in most of uveal melanoma cell lines. In breast cancer, upregulated RHPN1-AS1 is closely associated with advanced staging and poor prognosis (27). In this analysis, RHPN1-AS1 was upregulated in glioma tissues. However, in the present study, the expression of RHPN1-AS1 was detected only by RT-PCR and qRT-PCR, other methods should be used to detect RHPN1-AS1, which was a limitation of our study. Its level was correlated to histological grade, KPS score and postoperative recurrence of glioma patients, rather than sex, age or tumor size. Glioma patients expressing high level of RHPN1-AS1 suffered poor OS and RFS. Cox regression analysis indicated that advanced histological grade, KPS score <80 and high level of RHPN1-AS1 were independent risk factors influencing postoperative prognosis of glioma. Additionally, the lack of radiological data is another limitation of the present study. Future studies should be performed to collect radiological data from patients with glioma.
Our findings suggested that RHPN1-AS1 exerts a carcinogenic role in glioma, and it may be used as an independent factor to predict the disease progression of glioma. Nevertheless, potential bias caused by subject collection cannot be ruled out. Larger number of samples to further validate our findings and the molecular mechanism of RHPN1-AS1 in regulating the process of glioma is still required.
In conclusion, high level of RHPN1-AS1 is an independent risk factor for poor prognosis of glioma, which may be utilized as a prognostic hallmark.
Acknowledgements
Not applicable.
Funding
No funding was received.
Availability of data and materials
All data generated or analyzed during this study are included in this published article.
Authors' contributions
YW and WW designed the study and performed the experiments. WW and LT acquired the data. LT and LW analyzed the data. YW prepared the manuscript. All authors read and approved the final manuscript.
Ethics approval and consent to participate
The study was approved by the Ethics Committee of The Second People's Hospital of Wuhu (Anhui, China). Signed informed consent was obtained from the patients and/or guardians.
Patient consent for publication
Not applicable.
Competing interests
The authors declare that they have no competing interests.
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