1
|
Raychaudhuri S, Skommer J, Henty K, Birch
N and Brittain T: Neuroglobin protects nerve cells from apoptosis
by inhibiting the intrinsic pathway of cell death. Apoptosis.
15:401–411. 2010. View Article : Google Scholar : PubMed/NCBI
|
2
|
Tait SW and Green DR: Mitochondria and
cell death: outer membrane permeabilization and beyond. Nat Rev Mol
Cell Biol. 11:621–632. 2010. View
Article : Google Scholar : PubMed/NCBI
|
3
|
Holley AK, Dhar SK and St Clair DK:
Manganese superoxidedismutase versus p53: the mitochondrial center.
Ann NY Acad Sci. 1201:72–78. 2010. View Article : Google Scholar : PubMed/NCBI
|
4
|
Holley AK and St Clair DK: Watching the
watcher: regulation of p53 by mitochondria. Future Oncol.
5:117–130. 2009. View Article : Google Scholar : PubMed/NCBI
|
5
|
Burmester T and Hankeln T: What is the
function of neuroglobin? J ExpBiol. 212:1423–1428. 2009.PubMed/NCBI
|
6
|
Yu Z, Liu N, Liu J, Yang K and Wang X:
Neuroglobin, a novel target for endogenous neuroprotection against
stroke and neurodegenerative disorders. Int J Mol Sci.
13:6995–7014. 2012. View Article : Google Scholar : PubMed/NCBI
|
7
|
Pesce A, Dewilde S, Nardini M, Moens L,
Ascenzi P, Hankeln T, et al: Human brain neuroglobin structure
reveals a distinct mode of controlling oxygen affinity. Structure.
11:1087–1095. 2003. View Article : Google Scholar : PubMed/NCBI
|
8
|
Hankeln T, Ebner B, Fuchs C, Gerlach F,
Haberkamp M, Laufs TL, et al: Neuroglobin and cytoglobin in search
of their role in the vertebrate globin family. J Inorg Biochem.
99:110–119. 2005. View Article : Google Scholar : PubMed/NCBI
|
9
|
Yu Z, Xu J, Liu N, Wang Y, Li X, Pallast
S, et al: Mitochondrial distribution of neuroglobin and its
response to oxygen-glucose deprivation in primary-cultured mouse
cortical neurons. Neuroscience. 218:235–242. 2012. View Article : Google Scholar : PubMed/NCBI
|
10
|
Yu Z, Poppe JL and Wang X: Mitochondrial
mechanisms of neuroglobin's neuroprotection. Oxid Med Cell Longev.
2013:7569892013.
|
11
|
Fordel E, Thijs L, Martinet W, Schrijvers
D, Moens L and Dewilde S: Anoxia or oxygen and glucose deprivation
in SH-SY5Y cells: a step closer to the unraveling of neuroglobin
and cytoglobin functions. Gene. 398:114–122. 2007. View Article : Google Scholar
|
12
|
Watanabe S and Wakasugi K: Neuroprotective
function of human neuroglobin is correlated with its guanine
nucleotide dissociation inhibitor activity. Biochem Biophys Res
Commun. 369:695–700. 2008. View Article : Google Scholar
|
13
|
Brittain T, Skommer J, Raychaudhuri S and
Birch N: An antiapoptotic neuroprotective role for neuroglobin. Int
J Mol Sci. 11:2306–2321. 2010. View Article : Google Scholar : PubMed/NCBI
|
14
|
Yu Z, Liu N, Wang Y, Li X and Wang X:
Identification of neuroglobin-interacting proteins using yeast
two-hybrid screening. Neuroscience. 200:99–105. 2012. View Article : Google Scholar : PubMed/NCBI
|
15
|
Burmester T, Weich B, Reinhardt S and
Hankeln T: A vertebrate globin expressed in the brain. Nature.
407:520–523. 2000. View
Article : Google Scholar : PubMed/NCBI
|
16
|
Tiso M, Tejero J, Basu S, Azarov I, Wang
X, Simplaceanu V, et al: Human neuroglobin functions as a
redox-regulated nitrite reductase. J Biol Chem. 286:18277–18289.
2011. View Article : Google Scholar : PubMed/NCBI
|
17
|
Qin S and Zhou HX: meta-PPISP: a meta web
server for protein-protein interaction site prediction.
Bioinformatics. 23:3386–3387. 2007. View Article : Google Scholar : PubMed/NCBI
|
18
|
Huang B and Schroeder M: Using protein
binding site prediction to improve protein docking. Gene.
422:14–21. 2008. View Article : Google Scholar : PubMed/NCBI
|
19
|
Chen H and Zhou HX: Prediction of
interface residues in protein-protein complexes by a consensus
neural network method: test against NMR data. Proteins. 61:21–35.
2005. View Article : Google Scholar : PubMed/NCBI
|
20
|
Neuvirth H, Raz R and Schreiber G:
ProMate: a structure based prediction program to identify the
location of protein-protein binding sites. J Mol Biol. 338:181–199.
2004. View Article : Google Scholar : PubMed/NCBI
|
21
|
Liang S, Zhang C, Liu S and Zhou Y:
Protein binding site prediction using an empirical scoring
function. Nucleic Acids Res. 34:3698–3707. 2006. View Article : Google Scholar : PubMed/NCBI
|
22
|
Porollo A and Meller J: Prediction-based
fingerprints of protein-protein interactions. Proteins. 66:630–645.
2007. View Article : Google Scholar : PubMed/NCBI
|
23
|
Landau M, Mayrose I, Rosenberg Y, Glaser
F, Martz E, Pupko T and Ben-Tal N: ConSurf 2005: the projection of
evolutionary conservation scores of residues on protein structures.
Nucleic Acids Res. 33:W299–W302. 2005. View Article : Google Scholar : PubMed/NCBI
|
24
|
Franceschini A, Szklarczyk D, Frankild S,
Kuhn M, Simonovic M, Roth A, et al: STRING v9.1: protein-protein
interaction networks, with increased coverage and integration.
Nucleic Acids Res. 41:D808–D815. 2013. View Article : Google Scholar : PubMed/NCBI
|
25
|
Schneidman-Duhovny D, Inbar Y, Nussinov R
and Wolfson HJ: PatchDock and SymmDock: servers for rigid and
symmetric docking. Nucleic Acids Res. 33:W363–W367. 2005.
View Article : Google Scholar : PubMed/NCBI
|
26
|
Tovchigrechko A and Vakser IA: GRAMM-X
public web server for protein-protein docking. Nucleic Acids Res.
34:W310–W314. 2006. View Article : Google Scholar : PubMed/NCBI
|
27
|
Katchalski-Katzir E, Shariv I, Eisenstein
M, Friesem AA, Aflalo C and Vakser IA: Molecular surface
recognition: determination of geometric fit between proteins and
their ligands by correlation techniques. Proc Natl Acad Sci USA.
89:2195–2199. 1992. View Article : Google Scholar
|
28
|
Pierce BG, Hourai Y and Weng Z:
Accelerating protein docking in ZDOCK using an advanced 3D
convolution library. PLoS One. 6:e246572011. View Article : Google Scholar : PubMed/NCBI
|
29
|
Krissinel E and Henrick K: Inference of
macromolecular assemblies from crystalline state. J Mol Biol.
372:774–797. 2007. View Article : Google Scholar : PubMed/NCBI
|
30
|
Ferron F, Longhi S, Canard B and Karlin D:
A practical overview of protein disorder prediction methods.
Proteins. 65:1–14. 2006. View Article : Google Scholar : PubMed/NCBI
|
31
|
Guidolin D, Agnati LF, Albertin G,
Tortorella C and Fuxe K: Bioinformatics aggregation predictors in
the study of protein conformational diseases of the human nervous
system. Electrophoresis. 33:3669–3679. 2012. View Article : Google Scholar : PubMed/NCBI
|
32
|
Khan AA, Wang Y, Sun Y, et al:
Neuroglobin-overexpressing transgenic mice are resistant to
cerebral and myocardial ischemia. Proc Natl Acad Sci USA.
103:17944–17948. 2006. View Article : Google Scholar : PubMed/NCBI
|
33
|
Sun Y, Jin K, Mao XO, Zhu Y and Greenberg
DA: Neuroglobin is up-regulated by and protects neurons from
hypoxicischemic injury. Proc Natl Acad Sci USA. 98:15306–15311.
2001. View Article : Google Scholar : PubMed/NCBI
|
34
|
Sun Y, Jin K, Peel A, Mao XO, Xie L and
Greenberg DA: Neuroglobin protects the brain from experimental
stroke in vivo. Proc Natl Acad Sci USA. 100:3497–3500. 2003.
View Article : Google Scholar : PubMed/NCBI
|
35
|
Kluck RM, Ellerby LM, Ellerby HM, Naiem S,
Yaffe MP, Margoliash E, Bredesen D, Mauk AG, Sherman F and Newmeyer
DD: Determinants of cytochrome c pro-apoptotic activity. The role
of lysine 72 trimethylation. J Biol Chem. 275:16127–16133. 2000.
View Article : Google Scholar : PubMed/NCBI
|
36
|
Xu TR, Yang Y, Ward R, Gao L and Liu Y:
Orexin receptors: Multi-functional therapeutic targets for sleeping
disorders, eating disorders, drug addiction, cancers and other
physiological disorders. Cell Signal. 25:2413–2423. 2013.
View Article : Google Scholar
|
37
|
Depoortere I: GI functions of GPR39: novel
biology. Curr Opin Pharmacol. 12:647–652. 2012. View Article : Google Scholar : PubMed/NCBI
|
38
|
Lambright DG, Sondek J, Bohm A, Skiba NP,
Hamm HE and Sigler PB: The 2.0 Å crystal structure of a
heterotrimeric G protein. Nature. 379:311–319. 1996.
|
39
|
Wakasugi K, Nakano T and Morishima I:
Oxidized human neuroglobin acts as a heterotrimeric Galpha protein
guanine nucleotide dissociation inhibitor. J Biol Chem.
278:36505–36512. 2003. View Article : Google Scholar
|
40
|
Carson DA and Ribeiro JM: Apoptosis and
disease. Lancet. 341:1251–1254. 1993. View Article : Google Scholar : PubMed/NCBI
|
41
|
Lambert NA, Johnston CA, Cappell SD,
Kuravi S, Kimple AJ, Willard FS and Siderovski DP: Regulators of
G-protein signaling accelerate GPCR signaling kinetics and govern
sensitivity solely by accelerating GTPase activity. Proc Natl Acad
Sci USA. 107:7066–7071. 2010. View Article : Google Scholar : PubMed/NCBI
|
42
|
Bayrhuber M, Meins T, Habeck M, Becker S,
Giller K, Villinger S, et al: Structure of the human
voltage-dependent anion channel. Proc Natl Acad Sci USA.
105:15370–15375. 2008. View Article : Google Scholar : PubMed/NCBI
|
43
|
Liptak MD, Fagerlund RD, Ledgerwood EC,
Wilbanks SM and Bren KL: The proapoptotic G41S mutation to human
cytochrome c alters the heme electronic structure and increases the
electron self-exchange rate. J Am Chem Soc. 133:1153–1155. 2011.
View Article : Google Scholar : PubMed/NCBI
|