1
|
Ronco P and Debiec H: Pathophysiological
advances in membranous nephropathy: Time for a shift in patient's
care. Lancet. 385:1983–1992. 2015. View Article : Google Scholar : PubMed/NCBI
|
2
|
Ronco P and Debiec H: Pathogenesis of
membranous nephropathy: Recent advances and future challenges. Nat
Rev Nephrol. 8:203–213. 2012. View Article : Google Scholar : PubMed/NCBI
|
3
|
Herrmann SM, Sethi S and Fervenza FC:
Membranous nephropathy: The start of a paradigm shift. Curr Opin
Nephrol Hypertens. 21:203–210. 2012. View Article : Google Scholar : PubMed/NCBI
|
4
|
Beck LH Jr and Salant DJ: Membranous
nephropathy: Recent travels and new roads ahead. Kidney Int.
77:765–770. 2010. View Article : Google Scholar : PubMed/NCBI
|
5
|
Hofstra JM, Fervenza FC and Wetzels JF:
Treatment of idiopathic membranous nephropathy. Nat Rev Nephrol.
9:443–458. 2013. View Article : Google Scholar : PubMed/NCBI
|
6
|
Fervenza FC, Sethi S and Specks U:
Idiopathic membranous nephropathy: Diagnosis and treatment. Clin J
Am Soc Nephrol. 3:905–919. 2008. View Article : Google Scholar : PubMed/NCBI
|
7
|
Fujino T and Hasebe N: Alteration of
histone H3K4 methylation in glomerular podocytes associated with
proteinuria in patients with membranous nephropathy. BMC Nephrol.
17:1792016. View Article : Google Scholar : PubMed/NCBI
|
8
|
Sha WG, Shen L, Zhou L, Xu DY and Lu GY:
Down-regulation of miR-186 contributes to podocytes apoptosis in
membranous nephropathy. Biomed Pharmacother. 75:179–184. 2015.
View Article : Google Scholar : PubMed/NCBI
|
9
|
Cowley SM, Iritani BM, Mendrysa SM, Xu T,
Cheng PF, Yada J, Liggitt HD and Eisenman RN: The mSin3A
chromatin-modifying complex is essential for embryogenesis and
T-cell development. Mol Cell Biol. 25:6990–7004. 2005. View Article : Google Scholar : PubMed/NCBI
|
10
|
Kota SK and Kota SB: Noncoding RNA and
epigenetic gene regulation in renal diseases. Drug Discov Today.
22:1112–1122. 2017. View Article : Google Scholar : PubMed/NCBI
|
11
|
Jeck WR, Sorrentino JA, Wang K, Slevin MK,
Burd CE, Liu J, Marzluff WF and Sharpless NE: Circular RNAs are
abundant, conserved, and associated with ALU repeats. RNA.
19:141–157. 2013. View Article : Google Scholar : PubMed/NCBI
|
12
|
Huang S, Yang B, Chen BJ, Bliim N,
Ueberham U, Arendt T and Janitz M: The emerging role of circular
RNAs in transcriptome regulation. Genomics. 109:401–407. 2017.
View Article : Google Scholar : PubMed/NCBI
|
13
|
Memczak S, Jens M, Elefsinioti A, Torti F,
Krueger J, Rybak A, Maier L, Mackowiak SD, Gregersen LH, Munschauer
M, et al: Circular RNAs are a large class of animal RNAs with
regulatory potency. Nature. 495:333–338. 2013. View Article : Google Scholar : PubMed/NCBI
|
14
|
Szabo L, Morey R, Palpant NJ, Wang PL,
Afari N, Jiang C, Parast MM, Murry CE, Laurent LC and Salzman J:
Statistically based splicing detection reveals neural enrichment
and tissue-specific induction of circular RNA during human fetal
development. Genome Biol. 16:1262015. View Article : Google Scholar : PubMed/NCBI
|
15
|
Hansen TB, Jensen TI, Clausen BH, Bramsen
JB, Finsen B, Damgaard CK and Kjems J: Natural RNA circles function
as efficient microRNA sponges. Nature. 495:384–388. 2013.
View Article : Google Scholar : PubMed/NCBI
|
16
|
Li Z, Huang C, Bao C, Chen L, Lin M, Wang
X, Zhong G, Yu B, Hu W, Dai L, et al: Exon-intron circular RNAs
regulate transcription in the nucleus. Nat Struct Mol Biol.
22:256–264. 2015. View Article : Google Scholar : PubMed/NCBI
|
17
|
Hansen TB, Wiklund ED, Bramsen JB,
Villadsen SB, Statham AL, Clark SJ and Kjems J: miRNA-dependent
gene silencing involving Ago2-mediated cleavage of a circular
antisense RNA. EMBO J. 30:4414–4422. 2011. View Article : Google Scholar : PubMed/NCBI
|
18
|
Chen Y, Li C, Tan C and Liu X: Circular
RNAs: A new frontier in the study of human diseases. J Med Genet.
53:359–365. 2016. View Article : Google Scholar : PubMed/NCBI
|
19
|
Shen T, Han M, Wei G and Ni T: An
intriguing RNA species-perspectives of circularized RNA. Protein
Cell. 6:871–880. 2015. View Article : Google Scholar : PubMed/NCBI
|
20
|
Wang PL, Bao Y, Yee MC, Barrett SP, Hogan
GJ, Olsen MN, Dinneny JR, Brown PO and Salzman J: Circular RNA is
expressed across the eukaryotic tree of life. PLoS One.
9:e908592014. View Article : Google Scholar : PubMed/NCBI
|
21
|
Agarwal V, Bell GW, Nam JW and Bartel DP:
Predicting effective microRNA target sites in mammalian mRNAs.
ELife. 42015.doi: 10.7554/eLife.05005.
|
22
|
Wong N and Wang X: miRDB: An online
resource for microRNA target prediction and functional annotations.
Nucleic Acids Res. 43((Database Issue)): D146–D152. 2015.
View Article : Google Scholar : PubMed/NCBI
|
23
|
Ashburner M, Ball CA, Blake JA, Botstein
D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT,
et al: Gene ontology: Tool for the unification of biology. The gene
ontology consortium. Nat Genet. 25:25–29. 2000. View Article : Google Scholar : PubMed/NCBI
|
24
|
The Gene Ontology Consortium, . The Gene
Ontology Resource: 20 years and still GOing strong. Nucleic Acids
Res. 47:D330–D338. 2019. View Article : Google Scholar : PubMed/NCBI
|
25
|
Kanehisa M, Sato Y, Furumichi M, Morishima
K and Tanabe M: New approach for understanding genome variations in
KEGG. Nucleic Acids Res. 47:D590–D595. 2019. View Article : Google Scholar : PubMed/NCBI
|
26
|
Kanehisa M, Furumichi M, Tanabe M, Sato Y
and Morishima K: KEGG: New perspectives on genomes, pathways,
diseases and drugs. Nucleic Acids Res. 45:D353–D361. 2017.
View Article : Google Scholar : PubMed/NCBI
|
27
|
Huang da W, Sherman BT and Lempicki RA:
Systematic and integrative analysis of large gene lists using DAVID
Bioinformatics Resources. Nat Protoc. 4:44–57. 2009. View Article : Google Scholar : PubMed/NCBI
|
28
|
Huang DW, Sherman BT and Lempicki RA:
Bioinformatics enrichment tools: Paths toward the comprehensive
functional analysis of large gene lists. Nucleic Acids Res.
37:1–13. 2009. View Article : Google Scholar : PubMed/NCBI
|
29
|
Livak KJ and Schmittgen TD: Analysis of
relative gene expression data using real-time quantitative PCR and
the 2(-Delta Delta C(T)) method. Methods. 25:402–408. 2001.
View Article : Google Scholar : PubMed/NCBI
|
30
|
Shannon P, Markiel A, Ozier O, Baliga NS,
Wang JT, Ramage D, Amin N, Schwikowski B and Ideker T: Cytoscape: A
software environment for integrated models of biomolecular
interaction networks. Genome Res. 13:2498–2504. 2003. View Article : Google Scholar : PubMed/NCBI
|
31
|
Han D, Li J, Wang H, Su X, Hou J, Gu Y,
Qian C, Lin Y, Liu X, Huang M, et al: Circular RNA circMTO1 acts as
the sponge of microRNA-9 to suppress hepatocellular carcinoma
progression. Hepatology. 66:1151–1164. 2017. View Article : Google Scholar : PubMed/NCBI
|
32
|
Zheng Q, Bao C, Guo W, Li S, Chen J, Chen
B, Luo Y, Lyu D, Li Y, Shi G, et al: Circular RNA profiling reveals
an abundant circHIPK3 that regulates cell growth by sponging
multiple miRNAs. Nat Commun. 7:112152016. View Article : Google Scholar : PubMed/NCBI
|
33
|
Yu J, Yang M, Zhou B, Luo J, Zhang Z,
Zhang W and Yan Z: CircRNA-104718 acts as competing endogenous RNA
and promotes hepatocellular carcinoma progression through
microRNA-218-5p/TXNDC5 signaling pathway. Clin Sci (Lond).
133:1487–1503. 2019. View Article : Google Scholar : PubMed/NCBI
|
34
|
Glassock RJ: The pathogenesis of
idiopathic membranous nephropathy: A 50-year odyssey. Am J Kidney
Dis. 56:157–167. 2010. View Article : Google Scholar : PubMed/NCBI
|
35
|
Eddy SR: Non-coding RNA genes and the
modern RNA world. Nat Rev Genet. 2:919–929. 2001. View Article : Google Scholar : PubMed/NCBI
|
36
|
Wilson RC and Doudna JA: Molecular
mechanisms of RNA interference. Annu Rev Biophys. 42:217–239. 2013.
View Article : Google Scholar : PubMed/NCBI
|
37
|
Hu M, Wang R, Li X, Fan M, Lin J, Zhen J,
Chen L and Lv Z: LncRNA MALAT1 is dysregulated in diabetic
nephropathy and involved in high glucose-induced podocyte injury
via its interplay with β-catenin. J Cell Mol Med. 21:2732–2747.
2017. View Article : Google Scholar : PubMed/NCBI
|
38
|
Elsenreich A, Langer S, Herlan L and
Kreutz R: Regulation of podoplanin expression by microRNA-29b
associates with its antiapoptotic effect in angiotensin II-induced
injury of human podocytes. J Hypertens. 34:323–331. 2016.
View Article : Google Scholar : PubMed/NCBI
|
39
|
Noureddine L, Hajarnis S and Patel V:
MicroRNAs and polycystic kidney disease. Drug Discov Today Dis
Models. 10:e137–e1743. 2013. View Article : Google Scholar : PubMed/NCBI
|
40
|
Zhou Q, Chung AC, Huang XR, Dong Y, Yu X
and Lan HY: Identification of novel long noncoding RNAs associated
with TGF-β/Smad3-mediated renal inflammation and fibrosis by RNA
sequencing. Am J Pathol. 184:409–417. 2014. View Article : Google Scholar : PubMed/NCBI
|
41
|
Kato M, Wang M, Chen Z, Bhatt K, Oh HJ,
Lanting L, Deshpande S, Jia Y, Lai JY, O'Connor CL, et al: An
endoplasmic reticulum stress-regulated lncRNA hosting a microRNA
megacluster induces early features of diabetic nephropathy. Nat
Commun. 7:128642016. View Article : Google Scholar : PubMed/NCBI
|
42
|
Müller-Deile J, Dannenberg J, Schroder P,
Lin MN, Miner JH, Chen R, Bräsen JH, Thum T, Nyström J, Staggs LB,
et al: Podocytes regulate the glomerular basement membrane protein
nephronectin by means of miR-378a-3p in glomerular diseases. Kidney
Int. 92:836–849. 2017. View Article : Google Scholar : PubMed/NCBI
|
43
|
Huang YS, Hsieh HY, Shih HM, Sytwu HK and
Wu CC: Urinary Xist is a potential biomarker for membranous
nephropathy. Biochem Biophys Res Commun. 452:415–521. 2014.
View Article : Google Scholar : PubMed/NCBI
|
44
|
Hansen TB, Kjems J and Damgaard CK:
Circular RNA and miR-7 in cancer. Cancer Res. 73:5609–5612. 2013.
View Article : Google Scholar : PubMed/NCBI
|
45
|
You X, Vlatkovic I, Babic A, Will T,
Epstein I, Tushev G, Akbalik G, Wang M, Glock C, Quedenau C, et al:
Neural circular RNAs are derived from synaptic genes and regulated
by development and plasticity. Nat Neurosci. 18:603–610. 2015.
View Article : Google Scholar : PubMed/NCBI
|
46
|
Burd CE, Jeck WR, Liu Y, Sanoff HK, Wang Z
and Sharpless NE: Expression of linear and novel circular forms of
an INK4/ARF-associated non-coding RNA correlates with
atherosclerosis risk. PLoS Genet. 6:e10012332010. View Article : Google Scholar : PubMed/NCBI
|
47
|
Luan J, Jiao C, Kong W, Fu J, Qu W, Chen
Y, Zhu X, Zeng Y, Guo G, Qi H, et al: CircHLA-C plays an important
role in lupus nephritis by sponging miR-150. Mol Ther Nucleic
Acids. 10:245–253. 2018. View Article : Google Scholar : PubMed/NCBI
|
48
|
Zheng R, Deng Y, Chen Y, Fan J, Zhang M,
Zhong Y, Zhu R and Wang L: Astragaloside IV attenuates complement
membranous attack complex induced podocyte injury through the MAPK
pathway. Phytother Res. 26:892–898. 2012. View Article : Google Scholar : PubMed/NCBI
|
49
|
Shankland SJ, Pippin J, Pichler RH, Gordon
KL, Friedman S, Gold LI, Johnson RJ and Couser WG: Differential
expression of transforming growth factor-beta isoforms and
receptors in experimental membranous nephropathy. Kidney Int.
50:116–124. 1996. View Article : Google Scholar : PubMed/NCBI
|
50
|
Kiani A, Rao A and Aramburu J:
Manipulating immune responses with immunosuppressive agents that
target NFAT. Immunity. 12:359–372. 2000. View Article : Google Scholar : PubMed/NCBI
|
51
|
Davies CC, Mason J, Wakelam MJ, Young LS
and Eliopoulos AG: Inhibition of phosphatidylinositol 3-kinase- and
ERK MAPK-regulated protein synthesis reveals the pro-apoptotic
properties of CD40 ligation in carcinoma cells. J Biol Chem.
279:1010–1019. 2004. View Article : Google Scholar : PubMed/NCBI
|
52
|
Geer LY, Marchler-Bauer A, Geer RC, Han L,
He J, He S, Liu C, Shi W and Bryant SH: The NCBI BioSystems
database. Nucleic Acids Res. 38((Database Issue)): D492–D496. 2010.
View Article : Google Scholar : PubMed/NCBI
|
53
|
Ghosal S, Das S, Sen R, Basak P and
Chakrabarti J: Circ2Traits: A comprehensive database for circular
RNA potentially associated with disease and traits. Front Genet.
4:2832013. View Article : Google Scholar : PubMed/NCBI
|
54
|
Yang X, Wang X, Nie F, Liu T, Yu X, Wang
H, Li Q, Peng R, Mao Z, Zhou Q and Li G: miR-135 family members
mediate podocyte injury through the activation of Wnt/β-catenin
signaling. Int J Mol Med. 36:669–677. 2015. View Article : Google Scholar : PubMed/NCBI
|
55
|
Zhou L and Liu Y: Wnt/β-catenin signalling
and podocyte dysfunction in proteinuric kidney disease. Nat Rev
Nephrol. 11:535–545. 2015. View Article : Google Scholar : PubMed/NCBI
|
56
|
He W, Kang YS, Dai C and Liu Y: Blockade
of Wnt/β-catenin signaling by paricalcitol ameliorates proteinuria
and kidney injury. J Am Soc Nephrol. 22:90–103. 2011. View Article : Google Scholar : PubMed/NCBI
|