Deleted in malignant brain tumor 1 is a novel prognostic marker in colorectal cancer
- Authors:
- Published online on: March 1, 2018 https://doi.org/10.3892/or.2018.6287
- Pages: 2279-2287
Abstract
Introduction
Colorectal cancer (CRC) is the third most common cancer type worldwide (1) and the second most common one in Korea (2). Early diagnosis of CRC is critical to improve oncological outcomes and reduce medical expenses (3). In this study, identification of CRC-specific biomarkers may be useful for diagnosis, prognostication or prediction of therapeutic responses. The biomarkers for CRC identified to date are limited to serum carcinoembryonic antigen levels, mutations of KRAS, NRAS or BRAF and microsatellite instability in CRC tissues. Previous studies by our group reported fecal calgranulin B as a candidate maker for CRC diagnosis. However, calgranulin B was additionally detected in the stool of inflammatory bowel disease (IBD) patients (4,5). In a subsequent study aimed at determining a complementary fecal marker for CRC or IBD, deleted in malignant brain tumors 1 (DMBT1) was incidentally identified in stools of CRC as well as IBD patients [Yoo et al (unpublished data)].
DMBT1 is located on chromosome 10q25.3-q26.1 (6) and encodes three secretory glycoproteins, specifically, DMBT1 protein, salivary agglutinin (DMBT1SAG) and lung glycoprotein-340 (DMBT1gp340). DMBT1SAG and DMBT1gp340 secreted from the salivary gland and respiratory tract, respectively, share identical peptide sequences (7) and monoclonal antibody cross-reactivity (8). The DMBT1 protein is involved in mucosal innate immunity via binding to various pathogens and host molecules, including surfactant protein, immunoglobulin A and complement component 1q (9). However, upon secretion into the extracellular matrix, DMBT1 triggers terminal differentiation of epithelial cells (10,11). DMBT1 is mainly synthesized in the trachea, lung, small intestine, salivary gland and stomach (12). Expression of the protein is increased in gastrointestinal epithelium of patients with IBD (13) and Helicobacter pylori-associated gastritis (14).
Due to its repetitive genomic structure, DMBT1 is susceptible to genomic instability (15). Frequent homozygous deletion of DMBT1 was initially reported in medulloblastoma and glioblastoma (6), as reflected by the designated name ‘deleted in malignant brain tumor’. In subsequent studies, deletion and/or loss of mRNA expression were observed in esophageal, gastric, colorectal, lung and breast cancers (16–18), supporting the theory that DMBT1 is a tumor suppressor gene. Infrequent mutation of DMBT1 has been reported in astrocytic tumors (19). In addition, upregulation of DMBT1 has been reported in specific glioblastomas (20) and carcinomas of the stomach (21) and lung (22). These diverse observations imply complex roles of DMBT1 in carcinogenesis. To clarify the specific functions of DMBT1 in various cancer types, studies focusing on its clinicopathological impact are required. The present study investigated the diagnostic utility of fecal and tissue expression of DMBT1 in CRC along with its clinicopathological and prognostic significance.
Materials and methods
Stool sample preparation and patients
Initially, a liquid chromatography-mass spectrometry (LC-MS) analysis of DMBT1 in stool from IBD patients (n=3) was performed, which was extended to various groups of colorectal disease (IBD, CRC and colorectal adenomas). The analysis was performed using two sets: Development and validation. A total of 184 patients were enrolled in the developing (test) set (CRC, n=81; adenoma, n=32; IBD, n=20; and control, n=51), while the validation set included 256 individuals (CRC, n=93; adenoma, n=29; IBD, n=34; and control, n=100) from May 2007 to December 2009. Colonoscopy was performed with preparation and sedation according to individual patient characteristics. CRC and colorectal adenoma were diagnosed using colonoscopy and histopathology. Histopathological diagnosis was performed by one pathologist (HJC) according to the World Health Organization classification (23) and the 6th edition of the Tumor-Nodes-Metastasis classification of the American Joint Committee on Cancer (24). Advanced adenoma (AA) were defined as polyps of >1 cm in size, villous histopathology, high-grade dysplasia or carcinoma in situ (25). IBD cases included ulcerative colitis (n=35), Crohn's disease (n=12) and IBD, unclassified (n=7) and those were diagnosed based on patient symptoms, laboratory and colonoscopy parameters and histopathological features (26–29). Colonoscopy revealed negative findings in the control group. The persons with an incomplete colonoscopy, or hyperplastic polyps, or inflammatory polyps were excluded from this study.
Stool samples were collected prospectively prior to bowel preparation
Proteins were extracted from 0.1 g of stool in 0.3 ml PBS containing protease inhibitors via vigorous vortexing, followed by centrifugation at 12,000 × g for 10 min at room temperature. The supernatant was collected without disturbing the pellet and used for western blotting and LC-MS analyses, in accordance with previous studies (4,5).
SDS-PAGE and LC-MS analysis
Stool proteins from IBD patients were measured using Bicinchoninic Acid Protein Assay kit (Pierce; Thermo Fisher Scientific, Inc., Waltham, MA, USA). Equivalent amounts of stool protein (10 µg) were electrophoresed on 4–12% Bis-Tris Protein Gel (Invitrogen; Thermo Fisher Scientific, Inc.), then fixed in a fixer solution (40% methanol, 10% acetic acid) for 10 min and stained using a Colloidal Blue Staining kit (Invitrogen; Thermo Fisher Scientific, Inc.), according to the manufacturer's instructions. Gel slices containing stool proteins from IBD patients were excised, destained with 50% acetonitrile in 0.1 M ammonium bicarbonate and dried in a SpeedVac concentrator (Eppendorf, Hamburg, Germany) at room temperature. The dried gel pieces were immersed in 30 µl sodium bicarbonate solution (25 mM, pH 8.8) containing 50 ng trypsin (Promega Corp., Madison, WI, USA) at 37°C overnight. Samples were desalted using Zip-Tips C18 (EMD Millipore, Billerica, MA, USA) and dissolved in 10 µl 2% acetonitrile in 0.1% formic acid. Analysis was performed using a linear ion trap mass spectrometer system (LTQ-XL; Thermo Electron Corp., San Jose, CA, USA) at the Facility of Omics Core Laboratory, National Cancer Center (Goyang, Korea). Peptide separation was performed on an Agilent 1100 system (Agilent Technologies, Santa Clara, CA, USA). A 3-µl sample of the peptide mixture was injected onto a C18-PepMap column (150 mm; inner diameter, 75 µm; LC Packings, San Francisco, CA, USA), and separated with a gradient of 5–50% acetonitrile in 0.1% formic acid over 60 min. The spray voltage was set at +1.7 kV and capillary temperature at 200°C. The capillary voltage was set at +20 V, the tube lens voltage at +100 V and the auxiliary gas at zero. Full scan experiments were performed on the linear ion trap mass spectrometer in the mass/charge range of 150-2,000. Systematic MS/MS experiments were performed by changing the relative collision energy and monitoring the intensities of the fragment ions. All MS/MS samples were analyzed using the SEQUEST algorithm v.27, rev. 11 (Thermo Fisher Scientific, Inc.). SEQUEST was set up the SwissProt (ftp://ftp.ebi.ac.uk/pub/databases/uniprot/knowledgebase) and IPI human databases (ftp://ftp.ebi.ac.uk/pub/databases/IPI/current) assuming trypsin as the digestion enzyme. A fragment ion mass tolerance of 1.00 Da and parent ion tolerance of 1.2 Da were used for the SEQUEST search.
Western blot analysis
Equivalent amounts of stool protein (10 µg) as determined by a Bicinchoninic Acid Protein Assay kit (Pierce; Thermo Fisher Scientific, Inc.) were subjected to SDS-PAGE (4–12% Bis-Tris Protein Gel). After electrophoresis, the proteins were transferred to polyvinylidene difluoride membranes (EMD Millipore), followed by blocking via incubation in 1.5% non-fat dried milk (Bio-Rad Laboratories, Inc., Hercules, CA, USA) and 1 mM MgCl2 in Tris-buffered saline containing 1% Tween-20 for 2 h at 4°C. Membranes were incubated for 2 h at room temperature with primary antibody against DMBT1 (1:1,000, cat. no. sc-80616; Santa Cruz Biotechnology, Inc., Dallas, TX, USA), washed for 3×15 min with blocking solution, and incubated with diluted goat anti-mouse Ig human ads-horseradish peroxidase (HRP)-conjugated secondary antibody (1:10,000, cat. no. 1010-05; Southern Biotech, Birmingham, UK) for 1 h at room temperature. This step was followed by washing with blocking solution (3×15 min), incubation with WEST-ZOL® plus chemiluminescence reagent (iNtRON Biotechnology, Gyeonggi, Korea) for 1 min, at room temperature and exposure to X-ray film (Kodak Blue XB-1; Eastman Kodak, Rochester, NY, USA). The expression of total DMBT1 (Santa Cruz Biotechnology, Inc.) in the stool samples of 325 subjects was measured via western blot analysis and optical densities (ODs; arbitrary units of DMBT1 immunoreactive signal) of blots were quantified using TINA software (version 2.10e; Raytest Isotopenmegerate GmbH, Straubenhardt, Germany) after image scanning.
CRC tissue samples
Tissue microarray (TMA) blocks were constructed from formalin-fixed paraffin-embedded tissues of 385 patients with CRC who underwent surgical resection at the National Cancer Center of Korea (Goyang-si, Korea) from January 2003 to December 2003. One representative core tissue (2 mm in diameter) was taken from a paraffin block of each case and arranged in a new recipient paraffin block using a trephine apparatus (Superbiochips Laboratories, Seoul, Korea). Each TMA block contained one core of normal colorectal mucosal tissue (total number of normal tissues=8). Sections of 4 µm in thickness were obtained from each TMA block for immunohistochemical analysis. Clinical charts and pathological reports of the 385 patients were reviewed. The tissue study population included 152 women and 231 men with a mean age of 58 years (range, 25–86 years) and follow-up time of 64 months (range, 2–74 months).
Immunohistochemistry
Immunohistochemical staining was performed using a BenchMark XT automated slide stainer (Ventana Medical Systems, Inc., Tucson, AZ, USA). De-waxing was implemented using the BenchMark module (Ventana Medical Systems, Inc.). Antigen retrieval was performed with Cell Conditioning solution 1/EDTA (pH 8.0) for 30 min at 98°C using the BenchMark staining module (Ventana Medical Systems, Inc.). Sections were incubated with mouse monoclonal anti-gp340 (5D7) antibody [conjugated with goat anti-mouse IgG H&L HRP (cat. no. ab205719, 1:100, cat. no. ab17779; Abcam, Cambridge, UK)] for 40 min at 42°C, and staining was performed on a Ventana Bench mark XT autostainer and evaluated with an I-View diaminobenzidine detection kit (both from Ventana Medical Systems, Inc.). Slides were counterstained with hematoxylin II for 4 min at room temperature and Bluing reagent (cat. no. 760-2037; Ventana Medical Systems, Inc.) for 4 min at room temperature. For the negative control, tissue sections were incubated with Tris-buffered saline alone without the primary antibody. DMBT1 expression was quantitatively evaluated using a double scoring system by estimating the staining intensity and percentage of stained cancer cells. The staining intensity was classified as 1 (weak), 2 (moderate) or 3 (strong). Immunoreactivity was scored as 0–300 by multiplying the staining intensity by the percentage of cells stained. All immunohistochemical staining results were evaluated independently by two pathologists (HSP and HJC).
Statistical analysis
The OD values of DMBT1 expression levels in stool are expressed as the mean ± standard deviation. One-way analysis of variance (ANOVA) and the χ2 test were used to compare DMBT1 levels among CRC, IBD, adenoma and control groups. In order to compare stool DMBT levels between two individual groups, one-way ANOVA was conducted, followed by a post-hoc Dunnett's test. The diagnostic potential of fecal DMBT1 was evaluated using receiver operator characteristics (ROC) curves, and the area under the ROC curve (AUC) was calculated. Cut-off values for each marker were determined from ROC and AUC values.
The χ2 test was additionally employed to evaluate the association between the expression of DMBT1 determined by immunohistochemical analysis and clinicopathological features. Overall or disease-free survival was estimated using the Kaplan-Meier method and compared with the log-rank test. The prognostic value of protein expression was determined via multivariate analysis using the Cox proportional hazards regression model. P<0.05 was considered to indicate a statistically significant difference. All statistical analyses were performed using SPSS version 17.0 (SPSS Inc., Chicago, IL, USA).
Results
LC-MS analysis of DMBT1 in stool samples of IBD and CRC patients
Stool extracts from IBD patients were separated via SDS-PAGE. Gel slices were excised, digested with trypsin and analyzed using LC-MS to determine the peptide mass. A SEQUEST database search led to the identification of isoform 1 of DMBT1 (Fig. 1A). Upregulation of DMBT1 protein in stool samples of IBD and CRC patients relative to that in stool samples from healthy individuals was confirmed based on western blot analysis (Fig. 1B).
Fecal DMBT1 expression in CRC, adenoma, IBD and control groups
The mean fecal DMBT1 protein expression was higher in patients with CRC than that in the healthy control (P<0.0001) and adenoma groups (P<0.0001) as well as higher in the IBD than in the healthy control (P<0.01) and adenoma groups (P<0.05). However, fecal DMBT1 levels were not significantly different between patients with IBD and CRC or adenoma and healthy controls in the test and validation sets (P>0.05). Similar results were obtained with the combined set (Table I).
The AUC value for fecal DMBT1 compared between the CRC and control groups was 0.684. The cut-off value for DMBT1 per mg of stool protein was calculated as 1,224.0 OD. The proportion of patients positive for fecal DMBT1 was not significantly different among the subgroups of CRC patients according to CRC stage or site, or between advanced and non-advanced adenoma (Table II). The expression of fecal DMBT1 was also not different among the subgroups of IBD (Table II). The sensitivity of the fecal DMBT1 test for CRC, CRC+AA or CRC+AA+IBD was not high (48.9–50%), while the specificity and positive predictive value (PPV) were moderate (specificity, 86.8%; PPV, 81.3–85.3% compared with the control; Table III).
![]() | Table II.Number of patients with fecal DMBT1 expression (cut-off value of OD >1,224.05) in each group of combined-set diseases. |
![]() | Table III.Sensitivity, specificity and predictive value of fecal DMBT1 measurement for each group of combined-set diseases. |
Tissue expression of DMBT1 protein and clinicopathological correlation in CRC
In normal colorectal crypt epithelium, DMBT1 exhibited diffuse mild cytoplasmic expression with an average immunoreactive score (IR) of 90; DMBT1 was also expressed in inflammatory cells infiltrating stroma (Fig. 2). In CRC cells, DMBT1 expression was increased or decreased (Fig. 2) with a mean IR value of 117.26±58.71 (range, 0–285). For the χ2 test, DMBT1 tissue expression was classified as follows: Group 1 (IR ≤10), group 2 (IR >10 and <150) and group 3 (IR ≥150). A total of 18 out of 385 tumors (4.7%) were classified as group 1, 255 (66.2%) as group 2 and 112 (29.1%) as group 3. Group 1 (DMBT1 loss) was significantly associated with lymph node metastasis (P=0.016), distant metastasis (P=0.013), advanced stage (P=0.026) and higher histological grade (P=0.033). Conversely, group 3 (DMBT1 overexpression) was significantly associated with absence of lymph node metastasis (N0) or distant metastasis (M0), lower stage and low histological grade (Table IV).
![]() | Table IV.DMBT1 expression in CRC tissues and its association with clinical and pathological factors (n=385). |
Loss of DMBT1 expression and patient outcomes
Since group 1 (DMBT1 loss) was associated with adverse clinicopathological features, patients were subdivided into two groups according to their DMBT1 status (loss vs. no loss) for survival analysis. According to the univariate survival analysis, CRC patients with DMBT1 loss (group 1) had significantly shorter overall (P=0.005) and disease-free (P=0.001) survival than those without DMBT1 loss (groups 2 and 3; Table V; Fig. 3). According to the multivariate survival analysis (Table VI), loss of DMBT1 was an independent prognostic factor associated with poor overall survival (hazard ratio, 2.272; 95% confidence interval, 1.175–4.391; P=0.015) and disease recurrence (hazard ratio, 2.689; 95% confidence interval, 1.275–5.670; P=0.009) in CRC patients after adjusting for stage, as well as venous, lymphatic and perineural invasion. Furthermore, the stage, as well as venous and perineural invasion were independent prognostic factors associated with overall and disease-free survival.
Discussion
DMBT1, a multifunctional glycoprotein containing multiple scavenger receptor cysteine-rich domains (9), is involved in the mucosal immune defense, epithelial differentiation (9–11) and tumor suppression (6). While loss of DMBT1 mRNA expression has been detected in various cancer types (16,17), conflicting results have been reported by previous studies (20,21). In an earlier study on colon cancer, a decrease in DMBT1 mRNA was reported in 16.7% of cancer compared with that in normal tissue samples (17). However, the clinical validity of DMBT1 expression has not been evaluated in a large population of CRC patients.
In the present study, fecal DMBT1 expression was increased in patients with CRC, compared with that in the adenoma and control groups, but the levels were not significantly different from those of patients with IBD. In addition, DMBT1 expression was reported to be upregulated in neutrophils, monocytes and epithelial cells in IBD (30,31). Upregulation of fecal DMBT1 in CRC patients may be induced via interactions with cancer cells and microenvironments as well as immune reactions between epithelial and inflammatory cells. However, low levels of fecal DMBT1 in adenoma and control groups may be partly due to a less intense inflammatory reaction in adenoma or normal colorectal mucosal tissues, compared with that in CRC or IBD tissues. The results of the present study demonstrate that fecal DMBT1 is not effective for the differential diagnosis of CRC and IBD. However, a relatively high specificity (86.8%) was observed for colorectal disease (CRC+AA+IBD) despite the low sensitivity (48.9–50.0%).
Analysis of the clinical significance of DMBT1 expression in CRC tissues revealed that overexpression was more frequent than loss (29.1 vs. 4.7%). Furthermore, expression of DMBT1 was significantly associated with absence of lymph node metastasis (N0) or distant metastasis (M0), lower stage and low histologic grade in CRC patients. A previous study by Conde et al (21) reported that DMBT1 protein expression is frequently decreased in well-differentiated adenocarcinoma of the stomach. These conflicting results on the expression patterns in gastric cancer vs. CRC tissues may be attributed to differences in the applied antibody, criteria for determining DMBT1 expression and organ specificity. In contrast to the present result that loss of DMBT1 expression is an independent prognostic factor associated with poor overall and disease-free survival of CRC patients, an earlier study revealed no clinicopathological significance of DMBT1 mRNA expression in esophageal cancer (17). The complex DMBT1 expression patterns in cancer are potentially associated with functional dualism, i.e., epithelial protection and differentiation (32). In early carcinogenesis, DMBT1 upregulation may provide an advantage for clonal expansion. At the late tumor stage, DMBT1 inactivation may be beneficial, since differentiation counteracts tumor progression. The present results suggest that loss of DMBT1 protein expression represents an effective biomarker for tumor progression in CRC. Consistent with the present observations, Goeppert et al (33) reported that increased DMBT1 protein expression was associated with prolonged overall survival in biliary tract cancer.
The present study has a number of limitations. First, analysis of fecal DMBT1 was inefficient as a screening test for CRC due to its low sensitivity. However, this drawback may be overcome by combined application with another complementary biomarker in the future. Furthermore, tissue and stool samples of enrolled CRC patients were different. Fecal DMBT1 represents protein secreted by cancer cells and the microenvironment. Consequently, the fecal DMBT1 measured did not originate from cancer cells alone but included a combination of proteins excreted from cancer cells as well as inflammatory cells. However, the tissue expression of DMBT1 was also measured in CRC tissues, which did not include any stromal or inflammatory cell components. DMBT1 expression was additionally identified in inflammatory cells infiltrating stroma (Fig. 2). Despite the study limitations, the present results clearly demonstrate that DMTB1 protein has a role in the progression of CRC and loss of expression in tissue is a promising prognostic marker for CRC patients.
In conclusion, the present study indicated that DMBT1 is upregulated in stools of CRC patients, while exhibiting variable expression in CRC tissues. Loss of DMBT1 protein in CRC tissues is significantly associated with adverse clinicopathological features (advanced stage, lymph node or distant metastasis and high histological grade) and may be effectively utilized as an independent poor prognostic factor for CRC.
Acknowledgements
Not applicable.
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