1
|
Hun M, Barsanti M, Wong K, Ramshaw J,
Werkmeister J and Chidgey AP: Native thymic extracellular matrix
improves in vivo thymic organoid T cell output, and drives in vitro
thymic epithelial cell differentiation. Biomaterials. 118:1–15.
2017. View Article : Google Scholar
|
2
|
Tajima A, Pradhan I, Trucco M and Fan Y:
Restoration of thymus function with bioengineered thymus organoids.
Curr Stem Cell Rep. 2:128–139. 2016. View Article : Google Scholar : PubMed/NCBI
|
3
|
Andrew D and Aspinall R: Age-Associated
thymic atrophy is linked to a decline in IL-7 production. Exp
Gerontol. 37:455–463. 2002. View Article : Google Scholar : PubMed/NCBI
|
4
|
Yoon S, Yoo YH, Kim BS and Kim JJ:
Ultrastructural alterations of the cortical epithelial cells of the
rat thymus after cyclophosphamide treatment. Histol Histopathol.
12:401–413. 1997.PubMed/NCBI
|
5
|
Yoon S, Lee HW, Baek SY, Kim BS, Kim JB
and Lee SA: upregulation of TrkA neurotrophin receptor expression
in the thymic subcapsular, paraseptal, perivascular, and cortical
epithelial cells during thymus regeneration. Histochem Cell Biol.
119:55–68. 2003. View Article : Google Scholar : PubMed/NCBI
|
6
|
Lee HW, Kim BS, Kim HJ, Lee CW, Yoo HJ,
Kim JB and Yoon S: Upregulation of receptor activator of nuclear
factor-kappaB ligand expression in the thymic subcapsular,
paraseptal, perivascular, and medullary epithelial cells during
thymus regeneration. Histochem Cell Biol. 123:491–500. 2005.
View Article : Google Scholar : PubMed/NCBI
|
7
|
Lee HW, Kim SM, Shim NR, Bae SK, Jung IG,
Kwak JY, Kim BS, Kim JB, Moon JO, Chung JS and Yoon S: Expression
of nerve growth factor is upregulated in the rat thymic epithelial
cells during thymus regeneration following acute thymic involution.
Regul Pept. 141:86–95. 2007. View Article : Google Scholar : PubMed/NCBI
|
8
|
Park HJ, Kim MN, Kim JG, Bae YH, Bae MK,
Wee HJ, Kim TW, Kim BS, Kim JB, Bae SK and Yoon S: Up-Regulation of
VEGF expression by NGF that enhances reparative angiogenesis during
thymic regeneration in adult rat. Biochim Biophys Acta.
1773:1462–1472. 2007. View Article : Google Scholar : PubMed/NCBI
|
9
|
Kim YM, Kim HK, Kim HJ, Lee HW, JU SA,
Choi BK, Kwon BS, Kim BS, Kim JB, Lim YT and Yoon S: Expression of
4-1BB and 4-1BBL in thymocytes during thymus regeneration. Exp Mol
Med. 41:896–911. 2009. View Article : Google Scholar : PubMed/NCBI
|
10
|
Awong G, LaMotte-Mohs R and
Zúñiga-Pflücker JC: Key players for T-cell regeneration. Curr Opin
Hematol. 17:327–332. 2010. View Article : Google Scholar : PubMed/NCBI
|
11
|
Boehm T and Swann JB: Thymus involution
and regeneration: Two sides of the same coin? Nat Rev Immunol.
13:831–838. 2013. View
Article : Google Scholar : PubMed/NCBI
|
12
|
Downing AK, Knott V, Werner JM, Cardy CM,
Campbell ID and Handford PA: Solution structure of a pair of
calcium-binding epidermal growth factor-like domains: Implications
for the marfan syndrome and other genetic disorders. Cell.
85:597–605. 1996. View Article : Google Scholar : PubMed/NCBI
|
13
|
Hohenester E and Engel J: Domain structure
and organisation in extracellular matrix proteins. Matrix Biol.
21:115–128. 2002. View Article : Google Scholar : PubMed/NCBI
|
14
|
Takahama Y: Journey through the thymus:
Stromal guides for T-cell development and selection. Nat Rev
Immunol. 6:127–135. 2006. View
Article : Google Scholar : PubMed/NCBI
|
15
|
Koeppe JR, Beach MA, Baerga-Ortiz A, Kerns
SJ and Komives EA: Mutations in the fourth EGF-like domain affect
thrombomodulin-induced changes in the active site of thrombin.
Biochemistry. 47:10933–10939. 2008. View Article : Google Scholar : PubMed/NCBI
|
16
|
Singh AB and Harris RC: Autocrine,
paracrine and juxtacrine signaling by EGFR ligands. Cell Signal.
17:1183–1193. 2005. View Article : Google Scholar : PubMed/NCBI
|
17
|
Chim SM, Tickner J, Chow ST, Kuek V, Guo
B, Zhang G, Rosen V, Erber W and Xu J: Angiogenic factors in bone
local environment. Cytokine Growth Factor Rev. 24:297–310. 2013.
View Article : Google Scholar : PubMed/NCBI
|
18
|
Chim SM, Qin A, Tickner J, Pavlos N, Davey
T, Wang H, Guo Y, Zheng MH and Xu J: EGFL6 promotes endothelial
cell migration and angiogenesis through the activation of
extracellular signal-regulated kinase. J Biol Chem.
286:22035–22046. 2011. View Article : Google Scholar : PubMed/NCBI
|
19
|
Fitch MJ, Campagnolo L, Kuhnert F and
Stuhlmann H: Egfl7, a novel epidermal growth factor-domain gene
expressed in endothelial cells. Dev Dyn. 230:316–324. 2004.
View Article : Google Scholar : PubMed/NCBI
|
20
|
Wu F, Shirahata A, Sakuraba K, Kitamura Y,
Goto T, Saito M, Ishibashi K, Kigawa G, Nemoto H, Sanada Y and Hibi
K: Down-Regulation of EGFL8: A novel biomarker for advanced gastric
cancer. Anticancer Res. 31:3377–3380. 2011.PubMed/NCBI
|
21
|
Wu F, Shirahata A, Sakuraba K, Kitamura Y,
Goto T, Saito M, Ishibashi K, Kigawa G, Nemoto H, Sanada Y and Hibi
K: Down-Regulation of EGFL8: A novel prognostic biomarker for
patients with colorectal cancer. Anticancer Res. 31:2249–2254.
2011.PubMed/NCBI
|
22
|
Choi HJ, Yoon TD, Muhammad I, Jeong MH,
Lee J, Baek SY, Kim BS and Yoon S: Regulatory role of mouse
epidermal growth factor-like protein 8 in thymic epithelial cells.
Biochem Biophys Res Commun. 425:250–255. 2012. View Article : Google Scholar : PubMed/NCBI
|
23
|
Subhan F, Yoon TD, Choi HJ, Muhammad I,
Lee J, Hong C, Oh SO, Baek SY, Kim BS and Yoon S: Epidermal growth
factor-like domain 8 inhibits the survival and proliferation of
mouse thymocytes. Int J Mol Med. 32:952–958. 2013. View Article : Google Scholar : PubMed/NCBI
|
24
|
Faas SJ, Rothstein JL, Kreider BL, Rovera
G and Knowles BB: Phenotypically diverse mouse thymic stromal cell
lines which induce proliferation and differentiation of
hematopoietic cells. Eur J Immunol. 23:1201–1214. 1993. View Article : Google Scholar : PubMed/NCBI
|
25
|
Irizarry RA, Hobbs B, Collin F,
Beazer-Barclay YD, Antonellis KJ, Scherf U and Speed TP:
Exploration, normalization, and summaries of high density
oligonucleotide array probe level data. Biostatistics. 4:249–264.
2003. View Article : Google Scholar : PubMed/NCBI
|
26
|
Gentleman RC, Carey VJ, Bates DM, Bolstad
B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, et al:
Bioconductor: Open software development for computational biology
and bioinformatics. Genome Biol. 5:R802004. View Article : Google Scholar : PubMed/NCBI
|
27
|
Eisen MB, Spellman PT, Brown PO and
Botstein D: Cluster analysis and display of genome-wide expression
patterns. Proc Natl Acad Sci USA. 95:14863–14868. 1998. View Article : Google Scholar : PubMed/NCBI
|
28
|
Sherman BT, Huang da W, Tan Q, Guo Y, Bour
S, Liu D, Stephens R, Baseler MW, Lane HC and Lempicki RA: DAVID
Knowledgebase: A gene-centered database integrating heterogeneous
gene annotation resources to facilitate high-throughput gene
functional analysis. BMC Bioinformatics. 8:4262007. View Article : Google Scholar : PubMed/NCBI
|
29
|
Yuryev A, Mulyukov Z, Kotelnikova E,
Maslov S, Egorov S, Nikitin A, Daraselia N and Mazo I: Automatic
pathway building in biological association networks. BMC
Bioinformatics. 7:1712006. View Article : Google Scholar : PubMed/NCBI
|
30
|
Shakib S, Desanti GE, Jenkinson WE,
Parnell SM, Jenkinson EJ and Anderson G: Checkpoints in the
development of thymic cortical epithelial cells. J Immunol.
182:130–137. 2009. View Article : Google Scholar
|
31
|
Suzuki I, Martin S, Boursalian TE, Beers C
and Fink PJ: Fas ligand costimulates the in vivo proliferation of
CD81+ T Cells. Immunol. 165:5537–5543. 2000. View Article : Google Scholar
|
32
|
Rethi B, Vivar N, Sammicheli S, Fluur C,
Ruffin N, Atlas A, Rajnavolgyi E and Chiodi F: Priming of T cells
to fas-mediated proliferative signals by interleukin-7. Blood.
112:1195–1204. 2008. View Article : Google Scholar : PubMed/NCBI
|
33
|
Geretti E, Shimizu A and Klagsbrun M:
Neuropilin structure governs VEGF and semaphorin binding and
regulates angiogenesis. Angiogenesis. 11:31–39. 2008. View Article : Google Scholar : PubMed/NCBI
|
34
|
Sakurai A, Doçi CL and Gutkind JS:
Semaphorin signaling in angiogenesis, lymphangiogenesis and cancer.
Cell Res. 22:23–32. 2012. View Article : Google Scholar :
|
35
|
Takahashi K, Ishida M, Hirokawa K and
Takahashi H: Expression of the semaphorins sema 3D and sema 3F in
the developing parathyroid and thymus. Dev Dyn. 237:1699–1708.
2008. View Article : Google Scholar : PubMed/NCBI
|
36
|
Mine T, Harada K, Matsumoto T, Yamana H,
Shirouzu K, Itoh K and Yamada A: CDw108 expression during T-cell
development. Tissue Antigens. 55:429–436. 2000. View Article : Google Scholar : PubMed/NCBI
|
37
|
Corbel C, Lemarchandel V, Thomas-Vaslin V,
Pelus AS, Agboton C and Roméo PH: Neuropilin 1 and CD25
co-regulation during early murine thymic differentiation. Dev Comp
Immunol. 31:1082–1094. 2007. View Article : Google Scholar : PubMed/NCBI
|
38
|
Olson TS and Ley K: Chemokines and
chemokine receptors in leukocyte trafficking. Am J Physiol Regul
Integr Comp Physiol. 283:R7–R28. 2002. View Article : Google Scholar : PubMed/NCBI
|
39
|
Ying S, O'Connor B, Ratoff J, Meng Q,
Mallett K, Cousins D, Robinson D, Zhang G, Zhao J, Lee TH and
Corrigan C: Thymic stromal lymphopoietin expression is increased in
asthmatic airways and correlates with expression of Th2-attracting
chemokines and disease severity. J Immunol. 174:8183–8190. 2005.
View Article : Google Scholar : PubMed/NCBI
|
40
|
Heydtmann M, Lalor PF, Eksteen JA,
Hübscher SG, Briskin M and Adams DH: CXC chemokine ligand 16
promotes integrin-mediated adhesion of liver-infiltrating
lymphocytes to cholangiocytes and hepatocytes within the inflamed
human liver1. Immunol. 174:1055–1062. 2005. View Article : Google Scholar
|
41
|
Cowan JE, Baik S, McCarthy NI, Parnell SM,
White AJ, Jenkinson WE and Anderson G: Aire controls the
recirculation of murine Foxp3+ regulatory T-cells back
to the thymus. Eur J Immunol. 48:844–854. 2018. View Article : Google Scholar :
|
42
|
Rivino L, Gruarin P, Häringer B,
Steinfelder S, Lozza L, Steckel B, Weick A, Sugliano E, Jarrossay
D, Kühl AA, et al: CCR6 is expressed on an IL-10-producing,
autoreactive memory T cell population with context-dependent
regulatory function. J Exp Med. 207:565–577. 2010. View Article : Google Scholar : PubMed/NCBI
|
43
|
Balamayooran G, Batra S, Cai S, Mei J,
Worthen GS, Penn AL and Jeyaseelan S: Role of CXCL5 in leukocyte
recruitment to the lungs during secondhand smoke exposure. Am J
Respir Cell Mol Biol. 47:104–111. 2012. View Article : Google Scholar : PubMed/NCBI
|
44
|
Yan Q, Jiang L, Liu M, Yu D, Zhang Y, Li
Y, Fang S, Li Y, Zhu YH, Yuan YF and Guan XY: ANGPTL1 interacts
with integrin α1β1 to suppress HCC angiogenesis and metastasis by
inhibiting jAK2/STAT3 signaling. Cancer Res. 77:5831–5845. 2017.
View Article : Google Scholar : PubMed/NCBI
|
45
|
Leng L, Metz CN, Fang Y, Xu J, Donnelly S,
Baugh J, Delohery T, Chen Y, Mitchell RA and Bucala R: MIF signal
transduction initiated by binding to CD74. J Exp Med.
197:1467–1476. 2003. View Article : Google Scholar : PubMed/NCBI
|
46
|
Abu El-Asrar AM, Ahmad A, Siddiquei MM, De
Zutter A, Allegaert E, Gikandi PW, De Hertogh G, Van Damme J,
Opdenakker G and Struyf S: The proinflammatory and proangiogenic
macrophage migration inhibitory factor is a potential regulator in
proliferative diabetic retinopathy. Front Immunol. 10:27522019.
View Article : Google Scholar : PubMed/NCBI
|
47
|
Shibata A, Nagaya T, Imai T, Funahashi H,
Nakao A and Seo H: Inhibition of NF-kappaB activity decreases the
VEGF mRNA expression in MDA-MB-231 breast cancer cells. Breast
Cancer Res Treat. 73:237–243. 2002. View Article : Google Scholar : PubMed/NCBI
|
48
|
Laursen LS, Overgaard MT, Søe R, Boldt HB,
Sottrup-jensen L, Giudice LC, Conover CA and Oxvig C:
Pregnancy-Associated plasma protein-A (PAPP-A) cleaves insulin-like
growth factor binding protein (IGFBP)-5 independent of IGF:
Implications for the mechanism of IGFBP-4 proteolysis by PAPP-A.
FEBS Lett. 504:36–40. 2001. View Article : Google Scholar : PubMed/NCBI
|
49
|
Vacca A, Di Marcotullio L, Giannini G,
Farina M, Scarpa S, Stoppacciaro A, Calce A, Maroder M, Frati L,
Screpanti I and Gulino A: Thrombospondin-1 is a mediator of the
neurotypic differentiation induced by EGF in thymic epithelial
cells. Exp Cell Res. 248:79–86. 1999. View Article : Google Scholar : PubMed/NCBI
|
50
|
Otero DC, Baker DP and David M:
IRF7-Dependent IFN-β production in response to RANKL promotes
medullary thymic epithelial cell development. J Immunol.
190:3289–3298. 2013. View Article : Google Scholar : PubMed/NCBI
|
51
|
Chinoy MR, Graybill MM, Miller SA, Lang CM
and Kauffman GL: Angiopoietin-1 and VEGF in vascular development
and angiogenesis in hypoplastic lungs. Am J Physiol Lung Cell Mol
Physiol. 283:L60–L66. 2002. View Article : Google Scholar : PubMed/NCBI
|
52
|
Fagiani E1, Lorentz P, Kopfstein L and
Christofori G: Angiopoietin-1 and -2 exert antagonistic functions
in tumor angiogenesis, yet both induce lymphangiogenesis. Cancer
Res. 71:5717–5727. 2011. View Article : Google Scholar : PubMed/NCBI
|